EST details — SGN-E358404
| Search information |
| Request: 358404 | Match: SGN-E358404 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C103099 | Clone name: cLHT-35-O16 |
| ||
| Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C194199 [TUS-70-D5] | Trace: SGN-T347574 | EST: SGN-E546699 | Direction: 5' | Facility: INRA (MWG) |
| Clone: SGN-C194199 [TUS-70-D5] | Trace: SGN-T350289 | EST: SGN-E549414 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E358404 | Length: 603 bp (999 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E358404 [] (trimmed)
CTGACACCAAATTTGTTTTCTTTAAAAGGATAGCTTAAGACAAAAAAAAAGAGACCAAAACCCCTTTGTACCCAAAATTCTACTTTGTCACTTCA
AGAAATGGCAGCATCTGCAGCTTCAAGCTTTCAAATAACAATAGCTAGGCCATCCATACTCTCTACTAAAAGAATTTCCAGTTTCTGCTCAACAA
AGTTCGGCGGTGAAACTCAAAAACTGTCCTGTAACAGACTTGCCAGTAGTTGTCATGTTTCATCCATTCAACATTTTTGGCGCAGTTTCACATCT
ACGACTCAAAAGTTTCAGAAAGTTGTTACCAAGGCAAAATCAGAAGCTGATGATAGCAAGCCCGCCTCTGTGTTGCCGATTGATTTGAGAGGTAA
AAGGGCTTTTATAGCTGGTATAGCTGATGATAATGGATATGGGTGGGCTATTGCTAAGTCCCTGGCTGCTGCAGGTGCCGAAATTCTAGTTGGAA
CCTGGGTGCCAGCCTTAAACATTTTTGAAACAAGTCTTCGACGTGGAAAGTTTGATGAATCACGCGTTTTGCCACATGGTTCTTTGATGGAGATT
ACTAAAGTATACCCCCTCGATGCTGTTTTTGAT
AGAAATGGCAGCATCTGCAGCTTCAAGCTTTCAAATAACAATAGCTAGGCCATCCATACTCTCTACTAAAAGAATTTCCAGTTTCTGCTCAACAA
AGTTCGGCGGTGAAACTCAAAAACTGTCCTGTAACAGACTTGCCAGTAGTTGTCATGTTTCATCCATTCAACATTTTTGGCGCAGTTTCACATCT
ACGACTCAAAAGTTTCAGAAAGTTGTTACCAAGGCAAAATCAGAAGCTGATGATAGCAAGCCCGCCTCTGTGTTGCCGATTGATTTGAGAGGTAA
AAGGGCTTTTATAGCTGGTATAGCTGATGATAATGGATATGGGTGGGCTATTGCTAAGTCCCTGGCTGCTGCAGGTGCCGAAATTCTAGTTGGAA
CCTGGGTGCCAGCCTTAAACATTTTTGAAACAAGTCTTCGACGTGGAAAGTTTGATGAATCACGCGTTTTGCCACATGGTTCTTTGATGGAGATT
ACTAAAGTATACCCCCTCGATGCTGTTTTTGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E358404] | SGN-U568214 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T172050 [Download] [View] | Facility Assigned ID: THTFH92TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0112 | Quality Trim Threshold: 14.5 |
Working
