EST details — SGN-E358828
| Search information |
| Request: 358828 | Match: SGN-E358828 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C102214 | Clone name: cLHT-24-B24 |
| ||
| Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E358828 | Length: 350 bp (920 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E358828 [] (trimmed)
TGTTTGGGCTGGTTCTCGTCATGATTTTGAACTTACAGATCGTATCTCTAAGCTTGTTGCTAATGATCCTGGCTTCAGTAAGGAGGGAAGAACCA
TGCTTCCTAGGAAAGAGCTATTCAAGAACACTCTAAGGAAGGCAGCATATGCATGGAAACGGATCATTGAACTTCGTTTATCTCAAGAGGAAGCG
ACTATGTTAAGGCGTTATGTAGATGAGCCTGCTTTTACTGATCTTCATTGGGGAATGTTTATACCTGCCATAAAAGGACAGGGCACAGATAAACA
GCAGGAAAAGTGGCTGCCGTTGGCTTACAAGATGCAAATAATTGGCTGTTATGCTCAAACTGAAC
TGCTTCCTAGGAAAGAGCTATTCAAGAACACTCTAAGGAAGGCAGCATATGCATGGAAACGGATCATTGAACTTCGTTTATCTCAAGAGGAAGCG
ACTATGTTAAGGCGTTATGTAGATGAGCCTGCTTTTACTGATCTTCATTGGGGAATGTTTATACCTGCCATAAAAGGACAGGGCACAGATAAACA
GCAGGAAAAGTGGCTGCCGTTGGCTTACAAGATGCAAATAATTGGCTGTTATGCTCAAACTGAAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E358828] | SGN-U581519 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T170388 [Download] [View] | Facility Assigned ID: THTDR12TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0037 | Quality Trim Threshold: 20.5 |
Working
