EST details — SGN-E358930
Search information |
Request: 358930 | Match: SGN-E358930 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C102451 | Clone name: cLHT-24-O8 |
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Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C194059 [TUS-69-N9] | Trace: SGN-T347333 | EST: SGN-E546458 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C194059 [TUS-69-N9] | Trace: SGN-T347334 | EST: SGN-E546459 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E358930 | Length: 347 bp (970 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E358930 [] (trimmed)
CCAGCAGGCCCGACTAAAACAGAGAATGACGCAGCAGTTTACGCGGTCTGGTTTTCCTCAGACACCCTGAAATGGCCTTGGTCAGCCTATTGAAA
ACAATCTTCGGAAAGAAGACCCATTCCAGAACAGGAAAATAGTGCAAAGTCCTCGTGTATCTGCAGGAGGCTTGCCTCAATCTCCTTTATCCTAT
GAGTCTGGAGGAGTTTAATAATGGTTCTGTAGGAGCTCAATATGGTGCAGCTGTGACTAGTGGACTTATACAATCAATGAAGGAGAAGCAAGGAT
CCACATCTGTTGCTCCAGCTGGTGGAACAACTTCTATGACTTCTAGCGCCAATGATTCCATG
ACAATCTTCGGAAAGAAGACCCATTCCAGAACAGGAAAATAGTGCAAAGTCCTCGTGTATCTGCAGGAGGCTTGCCTCAATCTCCTTTATCCTAT
GAGTCTGGAGGAGTTTAATAATGGTTCTGTAGGAGCTCAATATGGTGCAGCTGTGACTAGTGGACTTATACAATCAATGAAGGAGAAGCAAGGAT
CCACATCTGTTGCTCCAGCTGGTGGAACAACTTCTATGACTTCTAGCGCCAATGATTCCATG
Unigenes |
Current Unigene builds | |||||
[SGN-E358930] | SGN-U564905 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T170490 [Download] [View] | Facility Assigned ID: THTDP88TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.971 | Expected Error Rate: 0.0210 | Quality Trim Threshold: 20.5 |