EST details — SGN-E359398
Search information |
Request: 359398 | Match: SGN-E359398 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C102753 | Clone name: cLHT-31-I7 |
| ||
Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C194114 [TUS-69-P16] | Trace: SGN-T350265 | EST: SGN-E549390 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E359398 | Length: 553 bp (893 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E359398 [] (trimmed)
TTCTGCATTGGAACCAAATACAGTAATGCTTGGTCTCAAATCACCATCAAGTGATAATTGTGCATATGTGCCCATCTTTCGCTCAGGAAGCTATT
CTGAGATGGGACCCAAACAGTACATGGAAGATGAACATATCCGTATTGATAATCTCCGTGAACAAGTTGATGACTCCAAAGGTCTTCTTTCACAA
GGAGCATATTATGGTGTGTTTGATGGGCACGGTGGCATTGATGCTGCATCATTTACTCAAAATAATCTCCTTAATTTTATTTTAGAGGATTCCCA
TTTCCCATCAATGGTTAAAAAAGCTGTCAGGAATGCTTTCCAGAAAGCCGATAATACGTTAGCAGATACAAAGTCTCTAGATAGTTCCTCTGGAA
CAACTGCTCTGATTGCACTTATTTTAGGAAGGACCATGCTCATAGCTAATGCTGGGGACTCTCGAGCTGTATTAGGGAAGCGTGGAAGAGCAATT
GAATTGTCAAAAGACCACAAACCAAATGCTACTTCCGAGAAATTAAGAATTGAAAAACTAGGGGGCGTCATTTTTGAT
CTGAGATGGGACCCAAACAGTACATGGAAGATGAACATATCCGTATTGATAATCTCCGTGAACAAGTTGATGACTCCAAAGGTCTTCTTTCACAA
GGAGCATATTATGGTGTGTTTGATGGGCACGGTGGCATTGATGCTGCATCATTTACTCAAAATAATCTCCTTAATTTTATTTTAGAGGATTCCCA
TTTCCCATCAATGGTTAAAAAAGCTGTCAGGAATGCTTTCCAGAAAGCCGATAATACGTTAGCAGATACAAAGTCTCTAGATAGTTCCTCTGGAA
CAACTGCTCTGATTGCACTTATTTTAGGAAGGACCATGCTCATAGCTAATGCTGGGGACTCTCGAGCTGTATTAGGGAAGCGTGGAAGAGCAATT
GAATTGTCAAAAGACCACAAACCAAATGCTACTTCCGAGAAATTAAGAATTGAAAAACTAGGGGGCGTCATTTTTGAT
Unigenes |
Current Unigene builds | |||||
[SGN-E359398] | SGN-U567704 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T171784 [Download] [View] | Facility Assigned ID: THTEQ52THB |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.977 | Expected Error Rate: 0.0044 | Quality Trim Threshold: 14.5 |