EST details — SGN-E359699
Search information |
Request: 359699 | Match: SGN-E359699 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C107520 | Clone name: cLPP-5-M5 |
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Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E359699 | Length: 438 bp (962 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E359699 [] (trimmed)
AACTTTTAGCTAAAATATAATTCTCTCTGCAATTTTTCTGTTCTCATATATCGGCGGCCACCACATTTTCCTTTAAAAATGACTACATCAAGGCG
TCTTGCTGATAGGAAGGTGGAGAGGTTTGAGAAAAATATTACCAAGCGAGGAGCTGTTCCTGAAACTACTGCAAAGAAGGGAAGCCAGTATCCAG
TTGGCCCTATCTTGCTTGGATTCTTCGTCTTTGTTGTCATTGGCTCATCTTTGTTCCAGATAATAAGGACAGCAACCAGCGGGGGTATGGCTTAA
TCTTGCAAAGTTATACAAGTAGTGGCGCCTGCGTTGCTGTAGTTTTGTTTTCCTCAAAGTTTAGCTAAAAAAACTTTTGTAGGAATGTGTNTTTT
AATTTGTGAGACTCAAAATATAAATTTTCTCGTCTCATCATGTGGGTAAAAAAAAAAA
TCTTGCTGATAGGAAGGTGGAGAGGTTTGAGAAAAATATTACCAAGCGAGGAGCTGTTCCTGAAACTACTGCAAAGAAGGGAAGCCAGTATCCAG
TTGGCCCTATCTTGCTTGGATTCTTCGTCTTTGTTGTCATTGGCTCATCTTTGTTCCAGATAATAAGGACAGCAACCAGCGGGGGTATGGCTTAA
TCTTGCAAAGTTATACAAGTAGTGGCGCCTGCGTTGCTGTAGTTTTGTTTTCCTCAAAGTTTAGCTAAAAAAACTTTTGTAGGAATGTGTNTTTT
AATTTGTGAGACTCAAAATATAAATTTTCTCGTCTCATCATGTGGGTAAAAAAAAAAA
Unigenes |
Current Unigene builds | |||||
[SGN-E359699] | SGN-U578953 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T172889 [Download] [View] | Facility Assigned ID: TPOAQ75TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.963 | Expected Error Rate: 0.0138 | Quality Trim Threshold: 12.5 |