EST details — SGN-E360695
Search information |
Request: 360695 | Match: SGN-E360695 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C107940 | Clone name: cLPP-7-F14 |
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Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C194430 [TUS-70-M20] | Trace: SGN-T347970 | EST: SGN-E547095 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C194430 [TUS-70-M20] | Trace: SGN-T347971 | EST: SGN-E547096 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E360695 | Length: 417 bp (892 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E360695 [] (trimmed)
TCATTTTTTTTCTTTTTTTCTTTTTTATCTTTATTTTTTTGTCCTTCTGAAACTCAAAGGGAATGCTTCTCCCTTCCTTTGGTGGTCTCAAGATT
CAAGATTGGAAGAAAATGATCAAACATGTGTTATTATTATGCTTGATGATCCATTGTACTATAGCTGATCCAAAAGCTGTAGTTCCTGTTCCTGT
TCCTCCTGTTCCTGTTTCTGTTCCGCCTCTTCCGAAGCATGCATGGTTAACTCTACATGGTGATGAACCATATGTCGTTGCAAATGGGGGATTTT
CGGGACTTTATCCCCCACAAACAGAACTAGCTTATAGTCAATCAATTATATTTGGAAAGGGCGGTACTGTCTTGCTATGTGATCTTCATATGAGT
CGCGATGGACATGGATTTTGTCTCTCACAATTTAACC
CAAGATTGGAAGAAAATGATCAAACATGTGTTATTATTATGCTTGATGATCCATTGTACTATAGCTGATCCAAAAGCTGTAGTTCCTGTTCCTGT
TCCTCCTGTTCCTGTTTCTGTTCCGCCTCTTCCGAAGCATGCATGGTTAACTCTACATGGTGATGAACCATATGTCGTTGCAAATGGGGGATTTT
CGGGACTTTATCCCCCACAAACAGAACTAGCTTATAGTCAATCAATTATATTTGGAAAGGGCGGTACTGTCTTGCTATGTGATCTTCATATGAGT
CGCGATGGACATGGATTTTGTCTCTCACAATTTAACC
Unigenes |
Current Unigene builds | |||||
[SGN-E360695] | SGN-U571154 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T173098 [Download] [View] | Facility Assigned ID: TPOBB31TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.945 | Expected Error Rate: 0.0057 | Quality Trim Threshold: 14.5 |