EST details — SGN-E360708
| Search information |
| Request: 360708 | Match: SGN-E360708 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C108056 | Clone name: cLPP-7-L18 |
| ||
| Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C194447 [TUS-70-N13] | Trace: SGN-T348000 | EST: SGN-E547125 | Direction: 5' | Facility: INRA (MWG) |
| Clone: SGN-C194447 [TUS-70-N13] | Trace: SGN-T350359 | EST: SGN-E549484 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E360708 | Length: 513 bp (904 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E360708 [] (trimmed)
TTCTTCTTTATACTGATATTCAGATCTCTCTCTTTTACGATTCTTCGCATCAGCCATGGGTATCTGGGAAGCTTTTCTCAATTGGCTTCGAAGCC
TCTTCTTTAAGCAGGAAATGGAGCTTTCATTGATAGGATTGCAAAATGCAGGAAAAACATCTCTTGTAAATGTTATTGCAACTGGTGGATACAGT
GAAGACATGATACCAACTGTGGGATTTAACATGCGCAAAGTGACGAAAGGAAATGTCACTATAAAATTGTGGGACCTTGGAGGTCAACCCAGATT
CCGCAGTATGTGGGAGAGATACTGTCGTGCTGTTTCTGCTATAGTTTATGTTGTTGATGCTGCTGATCCTGATAACCTCAGCATATCAAGTAGTG
AACTCCATGACCTGCTGAGCAAGCCATCTCTGAGTGGTATTCCATTGCTGGTGCTGGGAAACAAAATTGACAAGCCTGATTCCCTGTCCAAACAG
GCTTTGACTGACCAGATGGGATTGAAATCAATAACTGA
TCTTCTTTAAGCAGGAAATGGAGCTTTCATTGATAGGATTGCAAAATGCAGGAAAAACATCTCTTGTAAATGTTATTGCAACTGGTGGATACAGT
GAAGACATGATACCAACTGTGGGATTTAACATGCGCAAAGTGACGAAAGGAAATGTCACTATAAAATTGTGGGACCTTGGAGGTCAACCCAGATT
CCGCAGTATGTGGGAGAGATACTGTCGTGCTGTTTCTGCTATAGTTTATGTTGTTGATGCTGCTGATCCTGATAACCTCAGCATATCAAGTAGTG
AACTCCATGACCTGCTGAGCAAGCCATCTCTGAGTGGTATTCCATTGCTGGTGCTGGGAAACAAAATTGACAAGCCTGATTCCCTGTCCAAACAG
GCTTTGACTGACCAGATGGGATTGAAATCAATAACTGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E360708] | SGN-U571254 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T173111 [Download] [View] | Facility Assigned ID: TPOBB69TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0078 | Quality Trim Threshold: 14.5 |
Working
