EST details — SGN-E362418
| Search information |
| Request: 362418 | Match: SGN-E362418 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C103463 | Clone name: cLPP-10-N6 |
| ||
| Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C194547 [TUS-71-B17] | Trace: SGN-T348171 | EST: SGN-E547296 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C194547 [TUS-71-B17] | Trace: SGN-T348172 | EST: SGN-E547297 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E362418 | Length: 535 bp (1122 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E362418 [] (trimmed)
ATCTGCGTAACATATTCTAACGCAGATCGTGACAAAGACTTTTATAAAAATGTCTTCGTCATCGAACGAGGACTCTCCATCATCAAATTCATCAT
CATCTCCACCAAATAATTCAAATAACAATTCACCACCCAAAAAAGATAATAGCTCTTCTTCTAATGGTAATGATAATGGTAATAATAATAGTAGT
AATAATAATAATAATAACAACAACAATAACAATAATTCAAACTCTCAATCTCCACCTTCTAACAACGATTCATCCTCTGGAAAAGATAATAACTC
CTCTTCTTCAAATAACAATAACAACAACAACAATAGTAACAACAACAATAACAATAATAATTCAAACTCTCAATCTCCTCCTTCTAATAACAATA
ATTCGTCATCCGGAAAAGATAACAACTCTTCTTCGAATAATAACAACAATGGTAACAACAATAATGGTAATAACAACAATAATGGTAATAACAAC
AATGGTAACAACAATAATGATAATAACAACAATGGTAACAACAATGATAATGACGATGAC
CATCTCCACCAAATAATTCAAATAACAATTCACCACCCAAAAAAGATAATAGCTCTTCTTCTAATGGTAATGATAATGGTAATAATAATAGTAGT
AATAATAATAATAATAACAACAACAATAACAATAATTCAAACTCTCAATCTCCACCTTCTAACAACGATTCATCCTCTGGAAAAGATAATAACTC
CTCTTCTTCAAATAACAATAACAACAACAACAATAGTAACAACAACAATAACAATAATAATTCAAACTCTCAATCTCCTCCTTCTAATAACAATA
ATTCGTCATCCGGAAAAGATAACAACTCTTCTTCGAATAATAACAACAATGGTAACAACAATAATGGTAATAACAACAATAATGGTAATAACAAC
AATGGTAACAACAATAATGATAATAACAACAATGGTAACAACAATGATAATGACGATGAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E362418] | SGN-U576509 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T176174 [Download] [View] | Facility Assigned ID: TPOBN75TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.877 | Expected Error Rate: 0.0060 | Quality Trim Threshold: 14.5 |
Working
