EST details — SGN-E362821
| Search information |
| Request: 362821 | Match: SGN-E362821 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C106628 | Clone name: cLPP-2-M18 |
| ||
| Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180235 [TUS-33-N9] | Trace: SGN-T186846 | EST: SGN-E374232 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180235 [TUS-33-N9] | Trace: SGN-T186847 | EST: SGN-E374233 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E362821 | Length: 674 bp (895 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E362821 [] (trimmed)
GAGATTCCCTTGTAATCTTTCATCGATCTTTCTTCGTTTTCTCGGCGAAATTTAGGGTTTGAATCTCGCTGTACGATCGCTATTCCGAAGTGAAC
TCTATATGCACGGCACCAATGAAGACAGGAACATCAACTTTGAACCCCTATGCAGACGCATATGTGCCTATTTCGAAAAGAGGGGCACCTGATGG
AAACAAAGAAGCTAGATCTCCAAATGAGTTCAAGAGTGGAAGTGAGGCTGTTTGGTTGGCACCTGGTGTGACAGCTGTGCGAAATCAACTGCAGA
CTCCCCAAATTGCTGATCAGTATAAACTGAAAGACTTCTCAACTTATGGCTCGCCATCACATAGTCCAGTAGGAACTATGGGTAAAGAAGTTCTG
GGTGAGGAATCTTTCATGGATTTGGCTTATCTTCAGATGACTTTTCCTGGAATGTCAGATGAGTCACTTTCTGAGGTCTATTTGGCAAACAGTTG
TGACATTGATGCTGCGGTTGACATGCTGAATCAGCTTGAGCTCTACTCTAGTGATGATTTTGAAAAGCTTCCAGACAGCCTTGACATTGGTGATG
TGTCAGACTCAGGGTTCTCAGGCGATAATTCATCTCAGAAATTGAAGACAGTGATAGGCGAAACTACTACAGTTGCTTCATCATCTGGTTTATCA
GACTCGCGT
TCTATATGCACGGCACCAATGAAGACAGGAACATCAACTTTGAACCCCTATGCAGACGCATATGTGCCTATTTCGAAAAGAGGGGCACCTGATGG
AAACAAAGAAGCTAGATCTCCAAATGAGTTCAAGAGTGGAAGTGAGGCTGTTTGGTTGGCACCTGGTGTGACAGCTGTGCGAAATCAACTGCAGA
CTCCCCAAATTGCTGATCAGTATAAACTGAAAGACTTCTCAACTTATGGCTCGCCATCACATAGTCCAGTAGGAACTATGGGTAAAGAAGTTCTG
GGTGAGGAATCTTTCATGGATTTGGCTTATCTTCAGATGACTTTTCCTGGAATGTCAGATGAGTCACTTTCTGAGGTCTATTTGGCAAACAGTTG
TGACATTGATGCTGCGGTTGACATGCTGAATCAGCTTGAGCTCTACTCTAGTGATGATTTTGAAAAGCTTCCAGACAGCCTTGACATTGGTGATG
TGTCAGACTCAGGGTTCTCAGGCGATAATTCATCTCAGAAATTGAAGACAGTGATAGGCGAAACTACTACAGTTGCTTCATCATCTGGTTTATCA
GACTCGCGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E362821] | SGN-U581037 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T173681 [Download] [View] | Facility Assigned ID: TPOAF81TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0068 | Quality Trim Threshold: 14.5 |
Working
