EST details — SGN-E362947
Search information |
Request: 362947 | Match: SGN-E362947 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C106675 | Clone name: cLPP-2-O19 |
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Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C180249 [TUS-33-N23] | Trace: SGN-T186854 | EST: SGN-E374240 | Direction: 3' | Facility: INRA |
Clone: SGN-C180249 [TUS-33-N23] | Trace: SGN-T186855 | EST: SGN-E374241 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E362947 | Length: 492 bp (992 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E362947 [] (trimmed)
AAAGATTAAAAAAAAAAAATACTCAAAAAGAGAAAGTGGTACATTTGTTTTTCAATTTATATGTAGAAAAAAAAAAGCATCATTAGCAAATAAAT
AACATTAATTAAAAGAGGAAAAAATGGGGGCATATAGGGCTGATGAAGATTATGATTATTTGTTTAAAGTTGTTCTTATAGGTGATTCTGGTGTT
GGCAAATCAAATTTGCTTTCTCGTTTTACAAAAAATGAATTTAGCCAAGAATCTAAATCTACAATTGGTGTTGAATTTGCTACAAGAACAATTCA
TGTTGATGATAAGATTATCAAAGCTCAGATTTGGGATACTGCTGGTCAAGAAAGGTATCGAGCCATCACTAGTGCATATTATCGAGGAGCAGTGG
GTGCCTTACTTGTTTATGACATTACTCGTCATGTAACGTTTGAAAATGTAGCAAGATGGCTCAAAGAACTCANAGACCACACAGACCAAAACATC
GTCGTCATGCTCGTCGG
AACATTAATTAAAAGAGGAAAAAATGGGGGCATATAGGGCTGATGAAGATTATGATTATTTGTTTAAAGTTGTTCTTATAGGTGATTCTGGTGTT
GGCAAATCAAATTTGCTTTCTCGTTTTACAAAAAATGAATTTAGCCAAGAATCTAAATCTACAATTGGTGTTGAATTTGCTACAAGAACAATTCA
TGTTGATGATAAGATTATCAAAGCTCAGATTTGGGATACTGCTGGTCAAGAAAGGTATCGAGCCATCACTAGTGCATATTATCGAGGAGCAGTGG
GTGCCTTACTTGTTTATGACATTACTCGTCATGTAACGTTTGAAAATGTAGCAAGATGGCTCAAAGAACTCANAGACCACACAGACCAAAACATC
GTCGTCATGCTCGTCGG
Unigenes |
Current Unigene builds | |||||
[SGN-E362947] | SGN-U584956 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T173807 [Download] [View] | Facility Assigned ID: TPOAE94TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.946 | Expected Error Rate: 0.0052 | Quality Trim Threshold: 14.5 |