EST details — SGN-E363027
| Search information |
| Request: 363027 | Match: SGN-E363027 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C106576 | Clone name: cLPP-2-J7 |
| ||
| Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180216 [TUS-33-M14] | Trace: SGN-T186606 | EST: SGN-E373641 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180216 [TUS-33-M14] | Trace: SGN-T186607 | EST: SGN-E373642 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E363027 | Length: 678 bp (906 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E363027 [] (trimmed)
GAAAAACAAAAACACATTTTTGATATGGCCTAATCCCATTTTATATTTATATATTCTTAATATTAATTTAACTTTCTTGAATGATGCGGGAGGAA
GTAGTTGTCCCTGTCGCGGAAGAAGAGGTTGTTGTTGATGATATCATGAGCATCAGCGACACTGATACAGAATCATCAGATGAACATTTGGATCA
TGATGATAATGATGATCATCAACCTATTTTTGATCAGCCTGGTCAATTAGTTACTCCTCTCGACATCAAAGCTTCAAGAAAACACGCGTTGCTTA
GATTAAGATGTAGGGTGGAAGATGCAATTCTTGGTGGATACATTTATGGTAAAAACAAAAACAAGTCTCTATCTGTTAAAACCATAACAGAGGAT
TTGACTGGAATTTCATTATGGGGTGTTCCATTATTACCAAGTGAAGATAACACGAGGACGGATATTGTTTTGTTGAATTTCTTGAGAGCTAAGGA
TTATGGTGTTTATGATGCGTATAAAATGATGAGGAAGACGTTGAGATGGAGAAGGGAATTTAGAGTAACGGAGATTCTTGATGAAAAACTATTTA
GTCCTGACCTCGAGAAATTGTGGTATAACGATGATGGTAAAGATAGGGAAGGAAGGCTATTATGTTATAATGTGTTTAGGAATATCAAGAACAAA
GAATTGGAAGAAG
GTAGTTGTCCCTGTCGCGGAAGAAGAGGTTGTTGTTGATGATATCATGAGCATCAGCGACACTGATACAGAATCATCAGATGAACATTTGGATCA
TGATGATAATGATGATCATCAACCTATTTTTGATCAGCCTGGTCAATTAGTTACTCCTCTCGACATCAAAGCTTCAAGAAAACACGCGTTGCTTA
GATTAAGATGTAGGGTGGAAGATGCAATTCTTGGTGGATACATTTATGGTAAAAACAAAAACAAGTCTCTATCTGTTAAAACCATAACAGAGGAT
TTGACTGGAATTTCATTATGGGGTGTTCCATTATTACCAAGTGAAGATAACACGAGGACGGATATTGTTTTGTTGAATTTCTTGAGAGCTAAGGA
TTATGGTGTTTATGATGCGTATAAAATGATGAGGAAGACGTTGAGATGGAGAAGGGAATTTAGAGTAACGGAGATTCTTGATGAAAAACTATTTA
GTCCTGACCTCGAGAAATTGTGGTATAACGATGATGGTAAAGATAGGGAAGGAAGGCTATTATGTTATAATGTGTTTAGGAATATCAAGAACAAA
GAATTGGAAGAAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E363027] | SGN-U568813 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T173887 [Download] [View] | Facility Assigned ID: TPOAG52TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.947 | Expected Error Rate: 0.0077 | Quality Trim Threshold: 14.5 |
Working
