Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E363143

Search information 
Request: 363143Match: SGN-E363143
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C105698Clone name: cLPP-19-D6
cartOrder Clone
Library Name: cLPPOrganism: Solanum pennellii (formerly Lycopersicon pennellii)

Tissue: pollen
Development Stage: pollen collected from open flowers

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C194833 [TUS-71-N15] Trace: SGN-T348663 EST: SGN-E547788 Direction: 3' Facility: INRA (MWG)
Clone: SGN-C194833 [TUS-71-N15] Trace: SGN-T350468 EST: SGN-E549593 Direction: 5' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E363143Length: 346 bp (996 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E363143 [] (trimmed) GGTCCAAAAAACACCCCTTTACCTAATTTCAACACAAAATCCTACCTTTTGAATCGTCACTATCACCACCATCATCACCAATCGACATATAATGT
CTTCTTCTCCAACCATTATCCCTGCCTCCGCCAATGTTATTTCTAGTAGTTTAGCCAACAAGGATTCCATGGAGGATTTAGTTGCTTTAAAAATC
AGCCTTTGGGGTGATTATCATATTGGAAAGACAAGTTTTTTGACAAAGTATGTATGAAAGGAGAAAGGGGAAGAAGGTTTTTCAACAACTGGGTT
GAACCATATGGACAAAACTCTATGTGTTAGTGGCGCTAGAATTTGCTACAACATTTGGGAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E363143] SGN-U564409 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T176991 [Download] [View] Facility Assigned ID: TPOCX15TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0206 Quality Trim Threshold: 14.5