EST details — SGN-E363606
Search information |
Request: 363606 | Match: SGN-E363606 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C106838 | Clone name: cLPP-3-G22 |
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Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E363606 | Length: 610 bp (895 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E363606 [] (trimmed)
GATGACTTCAGCAAACCTCTTACATGGAACACAAGAGTCAGAATTGCTCTAGGGGTCGCCCGTGCTCTTGAGTACCTGCATGAGGTTTGTTCTCC
ATCATGTCTCCACGGGAATATAAGAACTTCAAACATTGTGCTCGATGCTGAATTGAATTCTCGTCTCTGTGAGTGTGGCATGGCAATGTTTCATC
AGCGATCAAGCAAAAACTTGGATGCTGGATACACTGCTCCAGAATGCACAAAACCTTCTGCATATACTTTGAAGAGTGATGTTTATAGCTTCGGA
GTTGTCATGTTGGAACTATTGACAGGGCGAAAGCCTTTTGACAGTTCAAAGCCAAGATTAGAACAGTGTCTGGTCGAATGGGCATCGCCACAACT
ACATGATCTAGATGCCTTAGAGCAAATGGCTGATCCTGCTCTGCGTGGACTTTATCCTCCTAAATCTCTCTCTAGATTTGCCAATGTGACTGCTC
TGTGCGTTCAGCCGGAGCCAGAATTTCGACCACAAATGTCTGAGGTGGTCCGTTTAGTTCAAAAGTCGAATATGAGCCAGAGAGGTGATGATGAT
GATTACTGATACTTTCAGGTTCTCGGAGGAAAAAAAAAAA
ATCATGTCTCCACGGGAATATAAGAACTTCAAACATTGTGCTCGATGCTGAATTGAATTCTCGTCTCTGTGAGTGTGGCATGGCAATGTTTCATC
AGCGATCAAGCAAAAACTTGGATGCTGGATACACTGCTCCAGAATGCACAAAACCTTCTGCATATACTTTGAAGAGTGATGTTTATAGCTTCGGA
GTTGTCATGTTGGAACTATTGACAGGGCGAAAGCCTTTTGACAGTTCAAAGCCAAGATTAGAACAGTGTCTGGTCGAATGGGCATCGCCACAACT
ACATGATCTAGATGCCTTAGAGCAAATGGCTGATCCTGCTCTGCGTGGACTTTATCCTCCTAAATCTCTCTCTAGATTTGCCAATGTGACTGCTC
TGTGCGTTCAGCCGGAGCCAGAATTTCGACCACAAATGTCTGAGGTGGTCCGTTTAGTTCAAAAGTCGAATATGAGCCAGAGAGGTGATGATGAT
GATTACTGATACTTTCAGGTTCTCGGAGGAAAAAAAAAAA
Unigenes |
Current Unigene builds | |||||
[SGN-E363606] | SGN-U570917 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T175437 [Download] [View] | Facility Assigned ID: TPOAJ47TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.972 | Expected Error Rate: 0.0058 | Quality Trim Threshold: 12.5 |