EST details — SGN-E363610
Search information |
Request: 363610 | Match: SGN-E363610 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C106871 | Clone name: cLPP-3-I20 |
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Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C194296 [TUS-70-H6] | Trace: SGN-T347740 | EST: SGN-E546865 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C194296 [TUS-70-H6] | Trace: SGN-T347741 | EST: SGN-E546866 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E363610 | Length: 588 bp (894 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E363610 [] (trimmed)
TTTTCTGAGAAATAATTTCTAATGGCCGCTCCACCCGCTAGAGCTCGAGCTGATTACGATTACCTCATCAAACTCCTTTTGATCGGCGACAGCGG
TGTGGGTAAGAGTTGCCTTCTTTTACGTTTCTCAGATGGCTCCTTTACGACCAGTTTTATCACAACTATTGGTATTGACTTCAAGATAAGGACCA
TAGAGCTTGACAGTAAACGCATCAAATTGCAAATCTGGGATACTGCTGGTCAGGAGCGGTTCCGAACAATTACAACTGCTTACTACCGTGGAGCC
ATGGGTATATTGCTGGTGTACGATGTAACTGATGAGTCATCTTTTAACAACATCAGGAACTGGATAAGAAACATTGAACAGCATGCTTCCGACAA
TGTCAACAAAATACTGGTCGGCAACAAGGCTGACATGGATGAAAGCAAAAGGGCTGTTCCTACATCCAAGGGTCAAGCACTTGCTGATGAATATG
GCATTAAATTCTTTGAAACTAGTGCCAAGACAAATATGAATGTTGAGGAGGTTTTCTTTTCCATAGCTCGGGATATAAAACAAAAGCTTGCCGAA
TCTGACTCAAAGGCTGAG
TGTGGGTAAGAGTTGCCTTCTTTTACGTTTCTCAGATGGCTCCTTTACGACCAGTTTTATCACAACTATTGGTATTGACTTCAAGATAAGGACCA
TAGAGCTTGACAGTAAACGCATCAAATTGCAAATCTGGGATACTGCTGGTCAGGAGCGGTTCCGAACAATTACAACTGCTTACTACCGTGGAGCC
ATGGGTATATTGCTGGTGTACGATGTAACTGATGAGTCATCTTTTAACAACATCAGGAACTGGATAAGAAACATTGAACAGCATGCTTCCGACAA
TGTCAACAAAATACTGGTCGGCAACAAGGCTGACATGGATGAAAGCAAAAGGGCTGTTCCTACATCCAAGGGTCAAGCACTTGCTGATGAATATG
GCATTAAATTCTTTGAAACTAGTGCCAAGACAAATATGAATGTTGAGGAGGTTTTCTTTTCCATAGCTCGGGATATAAAACAAAAGCTTGCCGAA
TCTGACTCAAAGGCTGAG
Unigenes |
Current Unigene builds | |||||
[SGN-E363610] | SGN-U578937 | Tomato 200607 | Build 2 | 22 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T175441 [Download] [View] | Facility Assigned ID: TPOAJ58TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.981 | Expected Error Rate: 0.0029 | Quality Trim Threshold: 14.5 |