EST details — SGN-E364765
| Search information |
| Request: 364765 | Match: SGN-E364765 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C110335 | Clone name: cLPT-4-H13 |
| ||
| Library Name: cLPT | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: Alias clone SGN-C183232 is on microarray TOM1: SGN-S1-1-3.3.3.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183232 [TUS-41-K6] | Trace: SGN-T196511 | EST: SGN-E395185 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183232 [TUS-41-K6] | Trace: SGN-T199475 | EST: SGN-E398149 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E364765 | Length: 645 bp (923 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E364765 [] (trimmed)
CATTTCGAATCTTCTATCTTCTGCGTAGAAGCTACGATTTGGTTTTTGATTTTTTTCATCATCGAGCAATTTCATTGCTTTGATGCAAAAACAAG
AGGCATTTTCGGAGGGATTTGGTGCTGTTTTGATCTCTGGGTTTAGTTATGCCAGAGATCTTACGTGAGGAGAGCAGTTCATCTTCATCAACCAC
CGCCGGCACCATCACCGGCGCCGGCACCGGAGATTTCAAGCTTAACATATTTGGGAAATATGAGGTCGGGAAGCTTCTGGGTTGTGGTGCTTTTG
CAAAGGTTTATCATGCTAGGGATGTGAGGACGAGACAGAGCGTGGCGATTAAGACGGTAAGCAAGACGAAGATATTGAAAGGTGGTTTCACGGAG
CATGTTAAGAGGGAGATTTCTATCATGCGCAGGTTGCGTCATCCTCATATCGTGCGCCTCCATGAGGTGCTCGCGACGAAGACGAAGGTCTATTA
CGTTATGGAATTCGCTAAAGGTGGAGAGCTGTTTACGAAAGTTAGCAAAGGGAGATTCAGCGAGGATCTCAGCCGGAGATATTTTCAGCAGTTGA
TCTCCGCCGTTGATTATTGTCATTCTCGTGGTGTGTATCATCGAGATCTGAAACTGGAGAATCTGTTGCTTGATG
AGGCATTTTCGGAGGGATTTGGTGCTGTTTTGATCTCTGGGTTTAGTTATGCCAGAGATCTTACGTGAGGAGAGCAGTTCATCTTCATCAACCAC
CGCCGGCACCATCACCGGCGCCGGCACCGGAGATTTCAAGCTTAACATATTTGGGAAATATGAGGTCGGGAAGCTTCTGGGTTGTGGTGCTTTTG
CAAAGGTTTATCATGCTAGGGATGTGAGGACGAGACAGAGCGTGGCGATTAAGACGGTAAGCAAGACGAAGATATTGAAAGGTGGTTTCACGGAG
CATGTTAAGAGGGAGATTTCTATCATGCGCAGGTTGCGTCATCCTCATATCGTGCGCCTCCATGAGGTGCTCGCGACGAAGACGAAGGTCTATTA
CGTTATGGAATTCGCTAAAGGTGGAGAGCTGTTTACGAAAGTTAGCAAAGGGAGATTCAGCGAGGATCTCAGCCGGAGATATTTTCAGCAGTTGA
TCTCCGCCGTTGATTATTGTCATTCTCGTGGTGTGTATCATCGAGATCTGAAACTGGAGAATCTGTTGCTTGATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E364765] | SGN-U574324 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T178166 [Download] [View] | Facility Assigned ID: TPTAO43TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0099 | Quality Trim Threshold: 14.5 |
Working
