EST details — SGN-E365086
Search information |
Request: 365086 | Match: SGN-E365086 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C105247 | Clone name: cLPP-17-I17 |
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Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C194783 [TUS-71-L13] | Trace: SGN-T350454 | EST: SGN-E549579 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E365086 | Length: 605 bp (904 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E365086 [] (trimmed)
TTCTCTTTCTCTCTCTCTCCCTCTCCTGCTCTTTCTTCTTCTTCTTTCTTCCCCTGGATCTTCAAACCCAACCCAATCTCTCCAAATCATAAAAA
ATCGAAACAATCCTTTAATTTCTGTGTTTCTTTAACACATTTTTCTCAAAATCTTTCTTTTTAACTTTTTTTTTTTTGGACTGATCTGGTTTAGA
AACGGGTCTGATTTGATCACATCGTGGGAGATTGATAAAAGGGGAAGATCCTTTCGTCATATAAAGAAGTGGGTACTTTTTTATAAGCTGTCCGT
TAGAGGGCTGTTGAATAAAATAGGAAAGAGTTACCCAGTGGTGCAGCGGCTGGAAGAAGTTTAGTACAGGGTTGATAGAAAATCCTTATTCTATA
TTACCTAGTCCTTCTTCACCTTCATTATACAACTTTTATTATCTGAGATTCCTTTCTTCTCTTCTTAAACCAATTCCTAAGTGGAAGTGCTTTGT
CTTATATATGCTTGTATTGCCTTGCACGTTTCCTTGAGGGCCTTCTGCCTATTTGTGCTTTAAGTTTCTTGTTTTTGGTGTTTAGCTACAAAATA
AGCAAATATGATGTTTTAGCTTGCCATTTTACACA
ATCGAAACAATCCTTTAATTTCTGTGTTTCTTTAACACATTTTTCTCAAAATCTTTCTTTTTAACTTTTTTTTTTTTGGACTGATCTGGTTTAGA
AACGGGTCTGATTTGATCACATCGTGGGAGATTGATAAAAGGGGAAGATCCTTTCGTCATATAAAGAAGTGGGTACTTTTTTATAAGCTGTCCGT
TAGAGGGCTGTTGAATAAAATAGGAAAGAGTTACCCAGTGGTGCAGCGGCTGGAAGAAGTTTAGTACAGGGTTGATAGAAAATCCTTATTCTATA
TTACCTAGTCCTTCTTCACCTTCATTATACAACTTTTATTATCTGAGATTCCTTTCTTCTCTTCTTAAACCAATTCCTAAGTGGAAGTGCTTTGT
CTTATATATGCTTGTATTGCCTTGCACGTTTCCTTGAGGGCCTTCTGCCTATTTGTGCTTTAAGTTTCTTGTTTTTGGTGTTTAGCTACAAAATA
AGCAAATATGATGTTTTAGCTTGCCATTTTACACA
Unigenes |
Current Unigene builds | |||||
[SGN-E365086] | SGN-U564984 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T176798 [Download] [View] | Facility Assigned ID: TPOCM57TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.936 | Expected Error Rate: 0.0053 | Quality Trim Threshold: 14.5 |