EST details — SGN-E366397
| Search information |
| Request: 366397 | Match: SGN-E366397 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C109784 | Clone name: cLPT-1-A18 |
| ||
| Library Name: cLPT | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C194879 [TUS-71-P13] | Trace: SGN-T348742 | EST: SGN-E547867 | Direction: 5' | Facility: INRA (MWG) |
| Clone: SGN-C194879 [TUS-71-P13] | Trace: SGN-T350481 | EST: SGN-E549606 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E366397 | Length: 550 bp (996 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E366397 [] (trimmed)
TTTTCTTTACATTATGGTTTGAATTAATCGGTAAGTGGCCCTTCTTTTAGGAATTAGCATGTTGGGTTTTCTTGTGCTGATATAAATTTTGTTTG
TGTTAACTGCATCAACGGTGATCATGAACTTCTGATGCAGGTTTTGATCATAATAGTGCAGCCACACTTGTCGGTCTATTTGCTGCTGGATGCGC
ATTAGGATCCTTCTTTGGTGGAGTAGTTGCAGACAAAATTTCTCGAATATACCCCCATACAGGACGTGTCATGTGTGCTCAATTTAGTTCTTTTA
TGGGCATCCCATTCTCATGGTTCCTTCTTCGAATTATCTCTCCGTCTATAAGCAGCTATTCCACATTTGCTGTGACTTTATTCATAATGGGCCTC
ACAATCAGCTGGTGTGCTACTGCTACAAATGGTCCCATGTTTGCAGAAGTGGTGCCTTCAAAGCACCGCACCATGATTTATGCTTTTGATCGTGC
GTTTGAGGGTTCATTTTCTTCTTTTGCTGCTCCAATTGTAGGGATTCTTGCTGAGAAAATGTACGGTTATGATGC
TGTTAACTGCATCAACGGTGATCATGAACTTCTGATGCAGGTTTTGATCATAATAGTGCAGCCACACTTGTCGGTCTATTTGCTGCTGGATGCGC
ATTAGGATCCTTCTTTGGTGGAGTAGTTGCAGACAAAATTTCTCGAATATACCCCCATACAGGACGTGTCATGTGTGCTCAATTTAGTTCTTTTA
TGGGCATCCCATTCTCATGGTTCCTTCTTCGAATTATCTCTCCGTCTATAAGCAGCTATTCCACATTTGCTGTGACTTTATTCATAATGGGCCTC
ACAATCAGCTGGTGTGCTACTGCTACAAATGGTCCCATGTTTGCAGAAGTGGTGCCTTCAAAGCACCGCACCATGATTTATGCTTTTGATCGTGC
GTTTGAGGGTTCATTTTCTTCTTTTGCTGCTCCAATTGTAGGGATTCTTGCTGAGAAAATGTACGGTTATGATGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E366397] | SGN-U569216 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T177822 [Download] [View] | Facility Assigned ID: TPTAB09TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0034 | Quality Trim Threshold: 14.5 |
Working
