EST details — SGN-E367208
Search information |
Request: 367208 | Match: SGN-E367208 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C110583 | Clone name: cLPT-5-I3 |
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Library Name: cLPT | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E367208 | Length: 480 bp (927 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E367208 [] (trimmed)
ACTGTTAACTTTTATGTGGACTCACCTTGAGCGTCAAGCTGGAGGGCATGTCAAGGGTATGGGTGAAAAACAGATCGAAGTAGACAAGAGAATTT
TACGTACTCAAATTGGTGTACTAAAAAAAGAGCTAGAATCTGTTCGGAAGCATCGAAAACAATACAGGAACCGTCGTGTCTCTGTACCTGTCCCT
GTTGTATCTTTGGTTGGATACACAAATGCCGGAAAAAGTACACTTCTTAACCAGTTGACTGGGGCTGATGTTCTTGCCGAGGATCGATTATTCGC
TACACTTGATCCTACTACAAGAAGGGTGCAGATGAAGAATGGGAAGGAGTTCCTGCTTACAGATACTGTTGGCTTCATCCAAAAATTACCGACAA
CTCTGGTTGCAGCCTTTAAGGCAACACTTGAAGAAATCGCTGAGTCTTCAATTTTAGTGCATGTTGTGGACATCAGTCACCCACTAGCAGAGCAA
CAGAT
TACGTACTCAAATTGGTGTACTAAAAAAAGAGCTAGAATCTGTTCGGAAGCATCGAAAACAATACAGGAACCGTCGTGTCTCTGTACCTGTCCCT
GTTGTATCTTTGGTTGGATACACAAATGCCGGAAAAAGTACACTTCTTAACCAGTTGACTGGGGCTGATGTTCTTGCCGAGGATCGATTATTCGC
TACACTTGATCCTACTACAAGAAGGGTGCAGATGAAGAATGGGAAGGAGTTCCTGCTTACAGATACTGTTGGCTTCATCCAAAAATTACCGACAA
CTCTGGTTGCAGCCTTTAAGGCAACACTTGAAGAAATCGCTGAGTCTTCAATTTTAGTGCATGTTGTGGACATCAGTCACCCACTAGCAGAGCAA
CAGAT
Unigenes |
Current Unigene builds | |||||
[SGN-E367208] | SGN-U576389 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T178477 [Download] [View] | Facility Assigned ID: TPTAQ50TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.980 | Expected Error Rate: 0.0060 | Quality Trim Threshold: 14.5 |