EST details — SGN-E367980

Search information 
Request: 367980Match: SGN-E367980
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176051Clone name: TUS-22-P1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176051 is on microarray TOM1 spot ID 1-1-8.4.11.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C18796 [cLED-24-J4] Trace: SGN-T54915 EST: SGN-E241018 Direction: 5' Facility: TIGR
Clone: SGN-C176051 [TUS-22-P1] Trace: SGN-T180730 EST: SGN-E367981 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E367980Length: 671 bp (887 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E367980 [] (trimmed) AAACAGACATTCGAAATTGATTTCAACTGAAGTGCAATGTAAGAATGCTTCAACTTACAAAATGAATATCTAAAACACTTCCAAAATTTATGTCA
CGTCAAGGTAGGGTGTCCATGAGACAGTGGGGACAAGTTGGAGTGTTTAGTTGCCAATTGAGACCAAGTTGAAATGTCTCTCAAAGTAGGAGTGC
TTACTTGCCAGCTGAGCTCAAACGTGAGTGATATTTTATGTGTTATGAGTAATTAGTATGTCTAAGAAGGTATTCGTTTTCATCTTATTTCACAT
TTTTTTTGTTCTTCTACTTTGTGTTAGTAGTTCACAGTAACATTCTGCAGAAGTACAAGTTTAGCGCGCCCTCCATACTCCTCTGGTAAGACGTC
TTCGCCAACCTCTCTGATGAACTCTTGCATTTGTTCTTCACTTGTAACAATCCTAACCTTCTCCTGAGTAGCTTTATCAAGGAAGCGACAAACAA
ATTTCCATACGGTGACAAAGAATTGTGGCATGTGTAAAAGGTAACAAGCAGCTAAGCGCTCAGGGTAGTACGCCTGTAAAAACTGAAAACCAGTG
ATCAGTCCACGAAGATCAGCATTGTTATAGGTAATATGTTGGAGATCAACAACTCCAATAAGTTTCTCATTTTCTGTTTCTCTACCATTGAACGA
ACTTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E367980] SGN-U580649 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180729 [Download][View] Facility Assigned ID: FA0AAD10CH01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0049 Quality Trim Threshold: 14.5