EST details — SGN-E367981

Search information 
Request: 367981Match: SGN-E367981
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176051Clone name: TUS-22-P1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176051 is on microarray TOM1 spot ID 1-1-8.4.11.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C18796 [cLED-24-J4] Trace: SGN-T54915 EST: SGN-E241018 Direction: 5' Facility: TIGR
Clone: SGN-C176051 [TUS-22-P1] Trace: SGN-T180729 EST: SGN-E367980 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E367981Length: 637 bp (868 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E367981 [] (trimmed) AAAGAAAAAGCAGACAACTAAGAATGGATACAAATCAGGAAATTGCATTGACACAAATGAGAAAATCTGTTGAAAAGCTTGGATCTTCTACTGAA
AGTTATGGAGAGAAGACATTGATGAGGTTCTTGATTGCAAGATCAATGAACCCAGAGAAAGCTGCTAAGATGTTTTGTCAGTGGAAAAAATGGAG
GGCTGAAATGGTCCCACTTGGGTACATTACTGATTCTGAAGTTGCAGATGAATTAGCTGCTGAAAAAATTTATTTGCAGGGATTATCCAAGAATG
GCCACCCTGTTGTGATGGTTAAAAGTAACAAACATTTTCCTTCCAAGGATCAAGTTCAATTCAAGAAATTTGTGGTTCATCTACTAGACAAAACA
ATTGCAAGTTCGTTCAATGGTAGAGAAACAGGAAATGAGAAACTTATTGGAGTTGTTGATCTCCAACATATTACCTATAACAATGCTGATCTTCG
TGGACTGATCACTGGTTTTCAGTTTTTACAGGCGTACTACCCTGAGCGCTTAGCTGCTTGTTACCTTTTACACATGCCACAATTCTTTGTCACCG
TATGGAAATTTGTTTGTCGCTTCCTTGATAAAGCTACTCACGAGAAGGTTAGGATTGTTACAAGTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E367981] SGN-U580649 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180730 [Download][View] Facility Assigned ID: FA0AAD10CH01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0075 Quality Trim Threshold: 14.5