EST details — SGN-E368015

Search information 
Request: 368015Match: SGN-E368015
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175869Clone name: TUS-22-H11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175869 is on microarray TOM1 spot ID 1-1-6.4.11.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C17251 [cLED-19-B9] Trace: SGN-T53436 EST: SGN-E237522 Direction: 5' Facility: TIGR
Clone: SGN-C175869 [TUS-22-H11] Trace: SGN-T180765 EST: SGN-E368016 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E368015Length: 621 bp (953 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E368015 [] (trimmed) AAACAATTAAGGATAAGTTATTACATTACAAAACACCCAAAAATAACTACATTTTTCAAGTTCAACATTTTTAGTTTGAGCAAAACATAAGCGCC
AGGAAAGATATTTTCTGACTCAAGCACAACGTAATAACATGCTACTTCAAATACATACAGAATAGTCCCTTACCTTAAATTTAAAGTTAAAACTG
AAAAATCATGATTCATCAAGGTCAATATTGTTAGAGTGACTTGCAGTCTGCTACAACTTCAATGTTGACTTCATGTATTTTAAAGCAGATCGTAG
CATCGCTCTAGCTTTCCTATCTGGGATGCATCCAGACAACAACATTTCTTCATAAACAGCTGGAACCCTTTCAAACTTCTCCACACGTATCAAGG
TTTTCATGAGAGTGGTGTAAGTAACAACATCCGGCTTCATATCATTTTCTTTCATATACTTCAATACAGCAAAAGCTTCAGCATCTTTCCGATCC
TCACCAAATGCATTAATTAGTGAATTGAGAGCTAACAGGCTGGGCTTTAAACCATCACCCTTCATAATCCTAAAGGCATTTACTGCTTGTTCAGA
CAATCCCCTTTGTGCATAGGCATTTGATCAAGGCATTATAACATGGTTGAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368015] SGN-U572977 Tomato 200607 Build 2 13 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180764 [Download][View] Facility Assigned ID: FA0AAD10CD06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.938 Expected Error Rate: 0.0044 Quality Trim Threshold: 14.5