EST details — SGN-E368560

Search information 
Request: 368560Match: SGN-E368560
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176122Clone name: TUS-23-B24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176122 is on microarray TOM1 spot ID 1-1-1.2.10.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176122 [TUS-23-B24] Trace: SGN-T1388 EST: SGN-E378520 Direction: 5' Facility: Giov. Lab
Clone: SGN-C176122 [TUS-23-B24] Trace: SGN-T181486 EST: SGN-E368559 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E368560Length: 666 bp (872 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E368560 [] (trimmed) CACAACAAAGCCAAAAAAACTTCCATTATCCTTCTCTCAATTGGTATATCACACTTGCAAAAACCAAAAAAAATAAAGGTATAGTTTCTTAAATA
CTCTTATTTGTCTAAATGGGAAGGTCACCTTGTTGTGAGAAGGCACATACAAACAAAGGAGCATGGACTAAAGAAGAAGATGAAAGACTAATTTC
TTACATTAGAGCTCATGGTGAAGGTTGTTGGAGGTCTCTTCCTAAAGCTGCTGGACTTCTTCGATGCGGTAAAAGTTGTCGTCTCCGATGGATTA
ATTACTTAAGACCTGACCTTAAACGTGGTAACTTTACTGAAGAAGAAGATGAACTCATTATCAAACTCCATAGCCTCCTTGGAAACAAGTGGTCG
CTTATAGCAGGAAGATTACCAGGAAGAACAGATAACGAGATAAAAAACTATTGGAACACACATATAAGACGAAAGCTCTTGAGTCGAGGTATTGA
TCCAACAACACATAGATCAATCAATGATCCTACTACAATACCAAAAGTTACAACGATTACTTTTGCTGCTGCTCATGAAAATATTAAAGATATTG
ATCAACAAGATGAGATGATAAATATCAAAGCTGAATTCGTTGAAACAAGCAAAGAATCAGATAATAATGAAATAATTCAAGAAAAGTCATCATCA
T
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368560] SGN-U563435 Tomato 200607 Build 2 26 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181487 [Download][View] Facility Assigned ID: FA0AAD11DA12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0015 Quality Trim Threshold: 14.5