EST details — SGN-E368785

Search information 
Request: 368785Match: SGN-E368785
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177293Clone name: TUS-26-C19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177293 is on microarray TOM1 spot ID 1-1-6.3.6.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C37099 [cLEG-41-A20] Trace: SGN-T71902 EST: SGN-E258870 Direction: 5' Facility: TIGR
Clone: SGN-C177293 [TUS-26-C19] Trace: SGN-T182194 EST: SGN-E368784 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E368785Length: 637 bp (917 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E368785 [] (trimmed) TAATTAGTAATCATGAAGAAACAAACAATATGACCATTTCTTCTCTTCTTCTTCCTCCTCCTCCTCCTTTCATCAATTACAATAATAATAATAAT
AATATTTATGGAAAGTCTATTTCCATTCATCAACCTCATCGATTTTCGTTCCGAGTTATCAATGATTCGAATAGAACAGAGTTAGCTACTGAAGA
TGCTGATAAACTTGTAGATGGAATGGATTTTGGGGAATTGTGTGATGAGTTTGAATGCATTAGTAGCCCTTCTGTGGAAGCTACTGCTAGGCAGC
TAGTTCGAGATATTCTCGAACTACGTGAAGGCAATCGTGCCCTCGGTACCTTTGCTGTCTCTGTCAAGTATAAGGATCCAGTGAGAAGTTTTACA
GGACGAGACAAGTACAAGAGACCATTATGGATAACTGATGCTCTGCAGAATCCTAAACCGAGTGTGCAAGAAATGGTGATGTTATCAACAAGTGT
GTTGAATATTAAGTGGACAATAAAAGGAAAAGCAAAGTCATTGATTGGTAGCATAGGAGGGGATTTGATGATCAAAGTAAATTCAAGATTCACTT
TGAATCAAATAAGTGGACAAGTAGTTGAGCATGAAGAGGAATGGGATTTATCAGGATCATCCATCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368785] SGN-U580360 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182195 [Download][View] Facility Assigned ID: FA0AAD14AB10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5