EST details — SGN-E369246

Search information 
Request: 369246Match: SGN-E369246
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176960Clone name: TUS-25-E22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176960 is on microarray TOM1 spot ID 1-1-3.1.8.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C28745 [cLEF-49-B2] Trace: SGN-T62443 EST: SGN-E248935 Direction: 5' Facility: TIGR
Clone: SGN-C176960 [TUS-25-E22] Trace: SGN-T181737 EST: SGN-E369245 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E369246Length: 223 bp (954 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E369246 [] (trimmed) AAATTTTAAGAGAGAGAAACAAAAACAAACCGTCCTCATGATGGGCAGCTTCATGTACATTGCCATCCTACTTGCTGCCATAATCTCAACCGTCC
ATTCCTGCCCGCCATCAGATCGGGCAGCATTATTATCATTCCGAGCTGCCCTAAATGAATCTCACTTGGGTATTTTCAACTCATGGAAAGGCAAC
GACTGTTGCCATGAGTGGTACGGGGTGAGTTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369246] SGN-U578838 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181738 [Download][View] Facility Assigned ID: FA0AAD13BC11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0018 Quality Trim Threshold: 14.5