EST details — SGN-E369530
Search information |
Request: 369530 | Match: SGN-E369530 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C176433 | Clone name: TUS-23-O23 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C176433 is on microarray TOM1 spot ID 1-1-2.3.10.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C26739 [cLEF-41-G7] | Trace: SGN-T60224 | EST: SGN-E246809 | Direction: 5' | Facility: TIGR |
Clone: SGN-C176433 [TUS-23-O23] | Trace: SGN-T181105 | EST: SGN-E369531 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E369530 | Length: 581 bp (894 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E369530 [] (trimmed)
AATATGCTTCCTCAAATTACCTGTCAGCCTGAAATTCTATGGAAACAACTCTAAAGGGTTTCAACTTTTTCAGTACAAAAGGAAGGGTTTCAACT
TTTTCAGTACAAAGGGAACAAAATTAGCAAAGTTGGTACATGCCATTTCACCCCAGCAATAAGTATGAATAAACTATATCCACTAAAGCTAGGAC
AAAGGGAAAAAATCAACTAGTGTTTTCTGTCAAGGTTGAGTTTTGAACGAACACTCTCGGAGGCATGACTGTATTTGATTCGCAAATTAAAGGGA
GGCATATTGTATAAATTGATAATAATATGATGGGGCGGTTTATATATTGAAAGTGCAAAAAAAAAAATGAATGCTTGAATCCAGGATAGAGGTGA
AAAGGTAATTGGGATAAGCCTGATTTTGCATTTAAAGTCAATCAACTAATGTAGCTTTACGCAAGAGGAAGCATACACTTTTTGTTGAAAACAGC
ACAACATATAAACAATGAGTTGTATACTTACACACACTAACAATATAAAGTTGTGCTTATCATGTTCCTTTTGTCTGAGCAGTAAAAATTTTTTC
CCTGTCAAAGG
TTTTCAGTACAAAGGGAACAAAATTAGCAAAGTTGGTACATGCCATTTCACCCCAGCAATAAGTATGAATAAACTATATCCACTAAAGCTAGGAC
AAAGGGAAAAAATCAACTAGTGTTTTCTGTCAAGGTTGAGTTTTGAACGAACACTCTCGGAGGCATGACTGTATTTGATTCGCAAATTAAAGGGA
GGCATATTGTATAAATTGATAATAATATGATGGGGCGGTTTATATATTGAAAGTGCAAAAAAAAAAATGAATGCTTGAATCCAGGATAGAGGTGA
AAAGGTAATTGGGATAAGCCTGATTTTGCATTTAAAGTCAATCAACTAATGTAGCTTTACGCAAGAGGAAGCATACACTTTTTGTTGAAAACAGC
ACAACATATAAACAATGAGTTGTATACTTACACACACTAACAATATAAAGTTGTGCTTATCATGTTCCTTTTGTCTGAGCAGTAAAAATTTTTTC
CCTGTCAAAGG
Unigenes |
Current Unigene builds | |||||
[SGN-E369530] | SGN-U575916 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T181104 [Download][View] | Facility Assigned ID: FA0AAD11AH12FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.934 | Expected Error Rate: 0.0136 | Quality Trim Threshold: 14.5 |