EST details — SGN-E369706

Search information 
Request: 369706Match: SGN-E369706
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176905Clone name: TUS-25-C15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176905 is on microarray TOM1 spot ID 1-1-2.3.8.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C28143 [cLEF-46-L13] Trace: SGN-T61647 EST: SGN-E247236 Direction: 5' Facility: TIGR
Clone: SGN-C176905 [TUS-25-C15] Trace: SGN-T181569 EST: SGN-E369707 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E369706Length: 630 bp (948 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E369706 [] (trimmed) ATACTAAGCCCGATCAATCTGCACGCAGGCTATTCAATTGGCGAAATATTTACATGATTAAACAAAGAATGGCATTTATATTACATGTTAAAGAA
CCAACAACAGAAACCTGAGGGCACAAGTAAATGTTACATCATGCAGGCGAGGCGAAGCCTTGGGATTTCAGCTAAGCCAGAACCGTTGCTTATAA
GAGCTTTGATATTACACGGCAGGAAGTCCAAAATGCTGCTGATGCAGCTCTTAAAATAGCTGGGTTTTGGTATATCCCAATAGCTGTAGCCCCCC
AAGATGCTACATTGTAAATAACTTTGCTTCCATCCCATGCCTTTCGGAGCTTTCCTTTCTTTTTTTTCAAAGAGAATGTCTTGCTGAGAGCATCT
TGGAGTTGGTTTGGTGTCAAATCCTTAGTCTGCTTAAGAGATAACAGGTATGCAGCCATAAAGCAAGCTATACCATCCACTATATCTTCTTGCCT
TACTAAAACATAGTCTTCTCCATCTAACTCAGGATCTCCACCTTCCCAAAGGTCATTCTCATTGACCATGTCCCACGAACTTCCTTCTTCAGCTA
AGTTTTGTGGAACAGATGCTTGAGCATTTTCTAGCTTTTGAAGGAAATCTGAGCATTTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369706] SGN-U566460 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181568 [Download][View] Facility Assigned ID: FA0AAD13AB08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0088 Quality Trim Threshold: 14.5