EST details — SGN-E369816
Search information |
Request: 369816 | Match: SGN-E369816 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C177055 | Clone name: TUS-25-I21 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C177055 is on microarray TOM1 spot ID 1-1-4.1.8.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C28908 [cLEF-49-J15] | Trace: SGN-T62427 | EST: SGN-E248919 | Direction: 5' | Facility: TIGR |
Clone: SGN-C177055 [TUS-25-I21] | Trace: SGN-T181679 | EST: SGN-E369817 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E369816 | Length: 680 bp (907 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E369816 [] (trimmed)
GATTATCAAAGTAATTGCAATTAGTATTTTAAAAGGAAATACAACAAAAATACTAGCAAAATGTTCTGTCTTGACATTGATAAATACATGCAAAG
CTAAAACTGATACAATCCAAGAAGGTAAACAATGTCAATCTCTCCCATTTGAAGAACCTTTGAAAATCGCAAATTTTTCAGACAAGTAGAAGGGA
GAAAAAATACAAATCACGGCAACTCCAGGCGTAGTAGTTATCGGAAACACATCAATCTCTTCAACCTTCTTCTCCAAATTCCTTCGTGAATCTGT
CATGCACTTCAAGGTCGGATTTACTAACTGTTGGCCTTTGACGAGCAAGAACCTTATCAAAATCAGTCTTTGTAATGGGTGGCGGGATGATCTGG
GACGCGAGTCCTTTAGCAGCAAGTTCCTGCATAGTTGTCTGCACAGCACCCCGTTGCTTCGGTCCGCATGGAATCCAGGTACCATTAGAAGTTTG
AGTAAAGAACACAGCATCTTGTGTCTTACGTACAGGTTCAAATAGCACGTCCTTGACACAAACAGAAACATCTGAACCAGAAAAACCTTCTGTCT
TACGGGCCAGGTCTTCAAAGTCACACTCGTTCAAGTTATGGGGGGTATCACCTAAATGAACTTTGAACATGTGTTGCCGTGCCTTCAAATCAGGG
AGCGGAATGTAGATA
CTAAAACTGATACAATCCAAGAAGGTAAACAATGTCAATCTCTCCCATTTGAAGAACCTTTGAAAATCGCAAATTTTTCAGACAAGTAGAAGGGA
GAAAAAATACAAATCACGGCAACTCCAGGCGTAGTAGTTATCGGAAACACATCAATCTCTTCAACCTTCTTCTCCAAATTCCTTCGTGAATCTGT
CATGCACTTCAAGGTCGGATTTACTAACTGTTGGCCTTTGACGAGCAAGAACCTTATCAAAATCAGTCTTTGTAATGGGTGGCGGGATGATCTGG
GACGCGAGTCCTTTAGCAGCAAGTTCCTGCATAGTTGTCTGCACAGCACCCCGTTGCTTCGGTCCGCATGGAATCCAGGTACCATTAGAAGTTTG
AGTAAAGAACACAGCATCTTGTGTCTTACGTACAGGTTCAAATAGCACGTCCTTGACACAAACAGAAACATCTGAACCAGAAAAACCTTCTGTCT
TACGGGCCAGGTCTTCAAAGTCACACTCGTTCAAGTTATGGGGGGTATCACCTAAATGAACTTTGAACATGTGTTGCCGTGCCTTCAAATCAGGG
AGCGGAATGTAGATA
Unigenes |
Current Unigene builds | |||||
[SGN-E369816] | SGN-U573760 | Tomato 200607 | Build 2 | 40 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T181678 [Download][View] | Facility Assigned ID: FA0AAD13AE11FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.972 | Expected Error Rate: 0.0019 | Quality Trim Threshold: 14.5 |