EST details — SGN-E370230

Search information 
Request: 370230Match: SGN-E370230
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178106Clone name: TUS-28-E16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178106 is on microarray TOM1 spot ID 1-1-1.1.4.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64555 [cLEM-6-H22] Trace: SGN-T84513 EST: SGN-E270757 Direction: 5' Facility: TIGR
Clone: SGN-C178106 [TUS-28-E16] Trace: SGN-T183421 EST: SGN-E370231 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370230Length: 712 bp (892 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E370230 [] (trimmed) AACAATAAAATTCATCCATGATCATACAATTGAAAAGAACTAAAATCATACCAAGGTAGTATTCATCCATGATCATATAATTTAAAAGAACTAAA
CATTAAAAGTTCCTAAAGGGGAAATAGAATGTGTCCAATAACAAGATAAACTAACTGAAATCTACTAAATATTACTCCCAATTATGACAAATAAA
AAGCAATTTCTTCCAAAGTACCAATACTATGGTGACATTTCCCCTGTTATACCTGTGTAAAAAGAGAGGAAACAAAATTAAGATTGGACTTAATA
TATTCATACTAAGGTCAAAAAGTAGAATATGCAATACAGTTTATGTCTTCCATATGTAGTAATTCTCAGATTTATAAGATCTACAAAACAAATTA
TACATAATACAAAGGCATCCAAGGCATTATAGCATCTGCTATTCATGGATTTAGCATCTTTGAGGATTTATGTTTGGTATTGTTATAATTGTTAA
ATTTTGAAGTTCCTTTTTTAAAAAAAGAAGCCACTAAACAAAGCCACATCAGTGAATTTAATATCTCATACATATTGATATCTTTGAGGACCACC
AACTATGACATTTTGTCCTATTCAAAGTTTTTATTTCCAGATTACTCCTATGAATGACAAGCTCATCCCCAAGAAAAAATTAACTCAGTTAACAG
AGCATGCTATGATTTCCTCAGCTATGGACGATAGGGAGCAAGTTAAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370230] SGN-U580153 Tomato 200607 Build 2 15 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183420 [Download][View] Facility Assigned ID: FA0AAD16BC08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.913 Expected Error Rate: 0.0049 Quality Trim Threshold: 14.5