EST details — SGN-E370315

Search information 
Request: 370315Match: SGN-E370315
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178251Clone name: TUS-28-K17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178251 is on microarray TOM1 spot ID 1-1-8.3.4.11 [Order] [Tomato Microarray Database]
See unigene SGN-U585828 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C65062 [cLEM-8-D20] Trace: SGN-T85433 EST: SGN-E271882 Direction: 5' Facility: TIGR
Clone: SGN-C178251 [TUS-28-K17] Trace: SGN-T183243 EST: SGN-E370316 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E370315Length: 557 bp (910 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E370315 [] (trimmed) ATGCGTCAAGCAAAAGTTTCATGTCCCTCTTCTGCTTTACAGAGTGCAGGAACATCAGAAACATTGAGGTCCTTATTTAATAAAGAATGTCATAG
GTTACACGTTAAGATCATCAATGTCTGAGTCATTAACAAAAGTATAAAGCCTCTACAGTTATTCTGCAAAGAATGAAGGGAGAGGGGAAAAGAAC
AAACATGTAGGGGTGAACTGATATCAGTAGTAATTCATGTAATCAGCTACCAACATCCATCTTTATCGCACTTGCTTCCATTTCTATCCAGATCA
CAGAACAAGAGTTGCCCATGGAGGAGAATCCATGCCGAACCTTTTAAACTTCAGAGGACAAATATAAGTAACGAGTTGTACATAGATGTCTGAAC
AAAACCAACCAAAATCACACTGGGATTCTTCAAGTTCATGTGCCCGTGTCAATAAACAAGCAATCCTGAACTTGGCATTGTGTGAGAAAATTACG
GTTGACAGTCAAATTAGCTTGCATATGGTGTGTTTTATGAGAACCATCCTTCAGCTACTTTTATCGCTGTGTTACATGGTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370315] SGN-U585828 Tomato 200607 Build 2 32 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183242 [Download][View] Facility Assigned ID: FA0AAD16AF09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0072 Quality Trim Threshold: 14.5