EST details — SGN-E370316

Search information 
Request: 370316Match: SGN-E370316
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178251Clone name: TUS-28-K17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178251 is on microarray TOM1 spot ID 1-1-8.3.4.11 [Order] [Tomato Microarray Database]
See unigene SGN-U585828 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C65062 [cLEM-8-D20] Trace: SGN-T85433 EST: SGN-E271882 Direction: 5' Facility: TIGR
Clone: SGN-C178251 [TUS-28-K17] Trace: SGN-T183242 EST: SGN-E370315 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370316Length: 664 bp (892 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370316 [] (trimmed) GCTTCTTCGAGGGCTGAAATATATACACACAGCCAATGTCTTTCACCGTGACCTGAAACCCAAAAATATATTAGCAAATGCTGACTGCAAGCTTA
AGATCTGTGACTTTGGTCTTGCAAGAGTGGCCTTCAATGATACTCCAACAGCTATATTTTGGACTGATTATGTTGCTACGAGGTGGTATAGGGCT
CCTGAATTGTGTGGATCATTTTTCTCTAAGTATACACCAGCAATTGATATATGGAGCATTGGATGTATATTTGCAGAACTACTGACTGGGAAGCC
TCTCTTTCCAGGTAAAAATGTGGTTCACCAATTAGACTTGATGACCGATCTGTTGGGCACACCCTCCCCAGAATCCATTGCCAGGATAAGAAATG
AAAAGGCTCGGAGGTATTTGAGCAGTATGCGTAAGAAAAAGCCTGTACCTTTCTCCCATAAATTTCCACATGCAGATCCCCTTGCACTTCGTTTG
CTAGAAAGGATGCTTGCTTTTGATCCCAAGGATCGTCCTAATGCAGAAGAGGCTCTTGCAGATCCATATTTCAGGAATCTAGCCAAAGTGGAAAG
AGAACCCTCTGCTCAACCAGTTACAAAAAATGGAATTTGAGTTTGAAAGGCAAAGGATAACAAAGGAGGATGTGAGGGAGCTGATATTCAGAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370316] SGN-U585828 Tomato 200607 Build 2 32 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183243 [Download][View] Facility Assigned ID: FA0AAD16AF09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0070 Quality Trim Threshold: 14.5