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EST details — SGN-E370398

Search information 
Request: 370398Match: SGN-E370398
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178301Clone name: TUS-28-M19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178301 is on microarray TOM1 spot ID 1-1-6.1.4.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C65153 [cLEM-8-H3] Trace: SGN-T85574 EST: SGN-E272023 Direction: 5' Facility: TIGR
Clone: SGN-C178301 [TUS-28-M19] Trace: SGN-T183324 EST: SGN-E370397 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370398Length: 664 bp (885 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370398 [] (trimmed) GGCCAGATACTAACAACTCTTGGTACAATAAGACCATGACACTCGAAGGATGTAGGCAAGTATGCTCAACAAACTGTTCTTGCATAGCATATTCG
AGCCTAGATATAAGCAATGGAGATAAAGGTTGCTTGTTTTGGTCTGGTGAGTTGATTGATATCAGAGAGCTCTCTGGAAGAGGTCAAGACATTTA
CATACGAATGGATTCTTCAGACCTAGTTTCTCAGGCAAGTTCAAACAGAAATAAGACAGGGATACTCGCGGTGAGTTTCTCAGTTTTGGTGGCAA
TGATTCTGCTAGGCCTGATTCTGTTTATGTACATACGTAAAAAGAGGAAACTAAAACTCAAAGAGGATTTTGAGTTGCCACAGTTTCAACTGTCG
ATAATAACAAGAGCCACAGATAACTTTTCGGTCAACAATCAGATTGGAGAAGGTGGATATGGACCTGTTTATAAGGGAGTACTCGAAGAGGGACA
AGAAATTGCTGTGAAGAGACTATCAAGGACTTCCATGCAAGGAATTGATGAATTCAAGAACGAAGTTACCTATATTGCCAAGCTTCAGCATAGAA
ATCTTGTGAGACTTTTAGGCTGCTGCATTCAAGGGGAAGAAAAGATGTTGATCTACGAATACATGCCTAATAAAAGCCTGGACTCATACATATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370398] SGN-U577920 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183325 [Download][View] Facility Assigned ID: FA0AAD16AG10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0041 Quality Trim Threshold: 14.5