EST details — SGN-E370778

Search information 
Request: 370778Match: SGN-E370778
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178168Clone name: TUS-28-H6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178168 is on microarray TOM1 spot ID 1-1-3.4.4.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64660 [cLEM-6-M24] Trace: SGN-T84618 EST: SGN-E270862 Direction: 5' Facility: TIGR
Clone: SGN-C178168 [TUS-28-H6] Trace: SGN-T183711 EST: SGN-E370779 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370778Length: 725 bp (898 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E370778 [] (trimmed) AGGACAATGAATATGAATTCAAAAAGGTGACTTGCAGGTTCTTATCCAACCATGTATTAGGTCAAAGCATTGAAAACATAACCAGCCCGGGAGGA
ATAACAGCAACACAAGCTTGTAACGAAATTCTAAACAGAATTCCAAAAATGGAACATCAAAACTCTCAAACTCATGAGAAACAAAGAGAATCCAG
ATACATTTTCAAGGACAATCTAAACGTCTTTAATGGAGACTATAGCCAAAAAGCTTGCCTAGATGCAATTCCTAGTAACGCCCAATACCCCAAAC
CCTAATCAAACCATCTGTATATCCGCTGAAAAGTGTGCTTCCATCAGCACTCCAACTCAAACTGGTACAGTAAATGACCTTGGTTTTTGGTGCAG
TTCCACTCTCGTTAGCCATCTCACTCTCATGCTTGAGATCAACTTTAAGGTCAACCACGATGCTCTTGCTCTCCAAGTCCCAAATCTTAATGCTA
GACTCGGTGGCTGCGCAGAGCCAGTACCTGTTAGGACTAAAGCAGAGAGTATGAATGATGGAGCCAGCGTCAAGGGAGTAGAGCTTCTTCCCCTC
AGCCAAATCCCAGAGCAAAATAACTCCATCCTTGCCACCACTAGCGCACAAGGAACCATCAGGTGACACTGCCACAGTGTTCACATAGCCAGAGT
GTCCAGCAAGAGTCGAACGCAGCTTACAGTTGGTGAGGTTCCAGATTTTCACAGTACGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370778] SGN-U582604 Tomato 200607 Build 2 93 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183710 [Download][View] Facility Assigned ID: FA0AAD16DD03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5