EST details — SGN-E371049

Search information 
Request: 371049Match: SGN-E371049
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178505Clone name: TUS-29-F7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178505 is on microarray TOM1 spot ID 1-1-2.2.4.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72140 [cLER-1-E21] Trace: SGN-T91837 EST: SGN-E280283 Direction: 5' Facility: TIGR
Clone: SGN-C72140 [cLER-1-E21] Trace: SGN-T91838 EST: SGN-E280284 Direction: 3' Facility: TIGR
Clone: SGN-C178505 [TUS-29-F7] Trace: SGN-T184117 EST: SGN-E371048 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371049Length: 651 bp (918 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371049 [] (trimmed) ATATTTTGTGAGTATTTAATACGAAAGAAATAAAGATGGGATACTGGAAAGCAAAGGTTCTTCCAAAGATCAAGCAGATCTTTGATAAAAATGGA
CCCAAGAAAACTGCTGCTGCTGAGGCATGCAAGACTTTTGATCAAGCTAAGGAGGAATATAGCAAGGAGTTTGAAGAGAAGAAGACTGAGCTTCA
ACCCAAAGTTGTTGAAATTTATGAAGCTGCTGCAGTTGAGATCAAGAGCTTAGTGAAGGAACCAAAGGGTGCAGGGCTGAAGAAAAACTCAGATG
GGGTTCAGAAATTCCTTGATGACCTTGTCAAGATTGAATTTCCGGGATCAAAAGCTGTTAGCGAAGCAAGTTCAAACTTTGGGCCTTCCTATGTA
TCGGGCCCAATTATTTTTGTGTTCGAAAAAGTTTCCACTTTCATAGTCACAGAAGATAAGAAGGAAGAGGAACCCGCGGCTGCTGATGACGTGCA
TGCACCAGCCGCCACGTCAACTGAAGAGGTGGAGGTGAAGGTGAAGGAGAAGGAGAAGGAGATAGTTATTGAGTCTGGAGAACCAAACAAGGAAG
AAGCACCTGCTACTGTTGTTGCTGACGTGGCACCTGCAACTAATGTGGAAGAAGCACCAAAGGTGGTTTAATCATCGTATA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371049] SGN-U580472 Tomato 200607 Build 2 105 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184118 [Download][View] Facility Assigned ID: FA0AAD17CC04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0030 Quality Trim Threshold: 14.5