EST details — SGN-E371220

Search information 
Request: 371220Match: SGN-E371220
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178261Clone name: TUS-28-L3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178261 is on microarray TOM1 spot ID 1-1-6.4.4.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C65078 [cLEM-8-E16] Trace: SGN-T85362 EST: SGN-E271811 Direction: 5' Facility: TIGR
Clone: SGN-C178261 [TUS-28-L3] Trace: SGN-T183579 EST: SGN-E371219 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E371220Length: 526 bp (885 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371220 [] (trimmed) GACTTCTTCAGCCTAGCAGGGTAGACTGGATAAATTTACTTGATAGATTGTAGAACCGAAATCCTAGTCTATATTTGAAGATTGCAGAGCATGTG
CTTGGTGAAGAGTCATTCGAAACAAACATACGTGACTACTCAAAACTCATTGATGCCCATGCTAATGATAACCGGCGAGAAGATGCCGAGAGAAA
TATCCGAAAGATGAGAGAGAATGGAATTGTATTTGATATTCTCACATCAACAACCATGGTTCACATGTACAGCAAAGCAGGTGATCTGGATCGAG
CAAAAGCCGCATTTGAGAGCTTGAGAAGTCAAGGATTTCTACCAGACATGGGGGTTTACAGTTCCATGATCCTAGCCTATGTAAATGCTGGCGAC
CCGAAGAAAGGTGAATCATTGATGAAGGAAATGGAGGTAAGAGACATGAAACCCTTTAAGAAGATCTATATTGGCCCTCCTAAGGTCATTTTCTC
AGCACGGTGATGCTTATGGAGCCCAAAGAATAGCAACTTCAAATGCAATTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371220] SGN-U571312 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183580 [Download][View] Facility Assigned ID: FA0AAD16CF02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0128 Quality Trim Threshold: 14.5