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EST details — SGN-E371553

Search information 
Request: 371553Match: SGN-E371553
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178390Clone name: TUS-29-A12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178390 is on microarray TOM1 spot ID 1-1-5.1.4.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C65289 [cLEM-8-O10] Trace: SGN-T85384 EST: SGN-E271833 Direction: 5' Facility: TIGR
Clone: SGN-C178390 [TUS-29-A12] Trace: SGN-T1482 EST: SGN-E378763 Direction: 5' Facility: Giov. Lab
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Sequence 
Sequence Id: SGN-E371553Length: 616 bp (903 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E371553 [] (trimmed) GCTTCATTCCACCGATCCAGATCTCAAATCTCCGAGAGAGTGAAGAAGACGAAGAAGAAAATTGATTAGTAATGGCGGCCGTATCGCCATTAGCA
AAGTATAAGCTTGTGTTTTTGGGCGATCAATCTGTTGGAAAAACCAGCATCATTACTCGCTTCATGTACGATAAATTCGATACCACCTACCAGGC
TACCATTGGTATCGATTTTTTGTCCAAGACAATGTACCTTGAAGATCGTACAGTTCGCTTGCAGCTCTGGGATACTGCTGGTCAAGAGAGATTTA
GGAGTCTTATTCCCAGCTACATTAGAGATTCTTCTGTCGCTGTAATTGTGTTTGATGTTGCCAACCGTCAATCATTTCTAAACACTTCAAAGTGG
ATTGAGGAAGTACGTACTGAACGGGGAACTGATGTCATAATCGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGGCAAGTATCCATCGA
AGAAGGTGAATCCAAGGCTCGCGAGTTTAATGTAATGTTTATAGAAACTAGTGCTAAAGCAGGATTCAATATCAAGCCTCTGTTCCGAAAGATTG
CTGCTGCTTTACCTGGAATGGAAGCCCTTTCGTCCACGAAGCAAGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371553] SGN-U579137 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183882 [Download][View] Facility Assigned ID: FA0AAD17BA06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0055 Quality Trim Threshold: 14.5