EST details — SGN-E371684

Search information 
Request: 371684Match: SGN-E371684
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178676Clone name: TUS-29-M10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178676 is on microarray TOM1 spot ID 1-1-7.1.4.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72356 [cLER-1-O5] Trace: SGN-T91889 EST: SGN-E280335 Direction: 5' Facility: TIGR
Clone: SGN-C72356 [cLER-1-O5] Trace: SGN-T91890 EST: SGN-E280336 Direction: 3' Facility: TIGR
Clone: SGN-C178676 [TUS-29-M10] Trace: SGN-T184012 EST: SGN-E371683 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371684Length: 466 bp (924 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371684 [] (trimmed) CAACAGCAAGGCCAGGGGACTTAGTTGTGATAGATGTGAAGGGAAGCATACAAGGCAGTGGAGAAGTTTTTGTGGATACATTTGGTGGTGATGGA
ATGAAGAAGAGGCCATTGGCATTAGTAATGGGATCAAGGCCTTATAGTAAAGGAATTTGTGAAGGTATAGAAACAGTACTAAAAAGTATGAAGGC
AGGTGGAAAAAGAAGAGTGATAATTCCTCCAAATTTGGGATTTGGAGAAGAAGGAGCAGATTTAGGAACAGGGCTGCAAATTCCTCCATCTGCTA
CTCTTGAGTATGTTGTTGAAGTTGAAAAAGTTTCTATTGCACCTGCTTGATTGAAGGTATACAAATAAATAGTATAACTTCAAGTGTTTGCTACT
AAAGGAAAATGCAAAACAGTTGATTCTTGTACTGTTCTTTAGTTGACAAGAAAGATGTGTGGAAGTTTGATTACAACATATTGAGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371684] SGN-U577137 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184013 [Download][View] Facility Assigned ID: FA0AAD17BG05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.924 Expected Error Rate: 0.0004 Quality Trim Threshold: 12.5