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EST details — SGN-E371698

Search information 
Request: 371698Match: SGN-E371698
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178730Clone name: TUS-29-O16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178730 is on microarray TOM1 spot ID 1-1-1.3.4.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C70562 [cLER-15-D6] Trace: SGN-T95233 EST: SGN-E282713 Direction: 5' Facility: TIGR
Clone: SGN-C178730 [TUS-29-O16] Trace: SGN-T184026 EST: SGN-E371697 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371698Length: 566 bp (904 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371698 [] (trimmed) CAAGTCAGTGCTGAGCAACTCTGAGAAGCACAGCAAGTGGGATCACATTCTGGATTCTAGCATTTCTAAGGCATCGCTCAACGTTAGGAGCCAGA
TGTTAGCAGTCCTCAAATTGGCTCTAGCTTGTGTCAGTGTATCACCAGAAGGCCGGCCAAAGATGAAGAGTGTGCTTCGAGTGCTTCTCCATGCA
AGGTAATCGTACGTCAAAGGAGAAAGTCAAGGAGAAAACAGCCAAGATTGTTTTCTTCTTTTTCTTTTGGGGAGGAGCTGTAAGTGGTGAAGGTG
TTGTGATCTATGCAGAATATGCCAGTTTTGTCAGTTTATACATATTATATTAATGTAAACATATAGATATATGATGATAGTAGCTACATAACTTT
GAATATGATGTTAGTTCTCAGTGTAACATAGTCCATTTTTCTTGTTCATGTGTAATCATATATATATCATATCATATTATATTATAAGTGGGTAG
CCTCTACTTCATAAGTTGAATTAGAAAAACAACAAAAAAACTCTAGGGGGGGCCCTGTCCCCAATGTGGGCTATATTGAGTCTTGTTACAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371698] SGN-U573289 Tomato 200607 Build 2 18 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184027 [Download][View] Facility Assigned ID: FA0AAD17BH08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0025 Quality Trim Threshold: 12.5