EST details — SGN-E371726

Search information 
Request: 371726Match: SGN-E371726
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178861Clone name: TUS-30-E3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178861 is on microarray TOM1 spot ID 1-1-6.1.3.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C71239 [cLER-17-E5] Trace: SGN-T95948 EST: SGN-E283097 Direction: 5' Facility: TIGR
Clone: SGN-C178861 [TUS-30-E3] Trace: SGN-T184339 EST: SGN-E371725 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371726Length: 646 bp (905 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371726 [] (trimmed) ACCCAAAGAGATATCTGATTGAAAATATATTTTTTCAATTGATTGAGAGATTCATAATGTGTATTTGTATTTTTGTGATTCAATAATCAACAAAA
ACTGTTTTTGGGTGTAATCAAATATCTTATGTTTGATAAACCGCCAAAAAAATATTGTCTCGCGAACATTTAAGCTGATGTAGAGGTAGTGTAAG
AGCAATCTTTTGTTGTAATGGTATTTGATGAATGTGTGAGTGGTTGGCTTTCGTTTGTATCTTCATACTTGTCTCTTAACCCTTGAAAGTTGAAA
AGATCATAATCATCATAAAATCTTGATTCCATTGTAAACTCAGGGAGGTCAAGATGATTTTCAAGAATTTTGACTACAGCAGACATGGTTGGCCT
AAGTGCTGGAGATGGACTGGTACATAGCAAAGCTACATTTAACATTCTTAGAGCCTCGTCCTCGTTCAAATCACTGCCCAATGTTGCATCTACTA
CTTCCTTCAGTTTTCCTTGTCTTTGTAGAACAAGAGCCCAATCTAGGAGGCAGACAAATTTCTCATTGGGGCGATATGTCATGTTGCTTTTCCCA
GCAGCAATCTCTAATGCAAGAACTCCAAAACTGTAGACATCTGCTTTGTAGGTCAAGTAACCCCATAGTGCATATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371726] SGN-U574242 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184340 [Download][View] Facility Assigned ID: FA0AAD18AC02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.940 Expected Error Rate: 0.0047 Quality Trim Threshold: 14.5