EST details — SGN-E371927

Search information 
Request: 371927Match: SGN-E371927
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179060Clone name: TUS-30-M10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179060 is on microarray TOM1 spot ID 1-1-7.1.2.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78685 [cLES-6-H12] Trace: SGN-T98660 EST: SGN-E287208 Direction: 5' Facility: TIGR
Clone: SGN-C179060 [TUS-30-M10] Trace: SGN-T184540 EST: SGN-E371926 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371927Length: 708 bp (930 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371927 [] (trimmed) GTTGACATCTAATTTTGTCCTAAGTACGAAGAAAAATGGAAACTTACAAAGTTTGCGAAGGAACAACAGAATATCAAGACTTGTTACCTGTGATG
GCTGAAAAATTAGACGTGGAGGCCTTTGTGGCGGAGCTATGTGGTGGGTTCAGGCTTCTATCAGACCCTAAAAATGGATTGATCACATCGTCGAG
CTTACAAAAGAATTCGGGTTTTTTAGGGATGGAAGGGATGAGTAGAGAAGATGCAGAGGCTATGGTAAAAGAAGGAGACTTAGATGGAGATGGAG
CACTGAATGAAACTGAATTTTGTATTCTTATGGTTAGACTTAGTCCAGAAATGATGCAAGATGCTGAGGTATGGCTTGATAAGGCACTTCAAAGA
GAGTTAGCTAAATCATCTTGTTCATAATTGTCTATCAAAAATATGAAATGGACAAGAAGAAGAAAAAAAAGAATATGAGAAGCTTTAAATATCAT
ATGTATTATGGATTGAATGTTAAATTATATTTGTTCATTCCATATTACCATTCCCTCTCAATTGGATGTAATAAGTTTTAAGTTTACTAGTTTCT
AATTGAGATGAAAAGTTTATTTCAATTCTCAATATCAACATAATCCTCCTTCAAGTTTGACTAACTTCCCTAAACTATGTACCCTACACCACTCC
TATTTTTTTTTTTTTTTGATGTCCGATAAACTTGCATGAATTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371927] SGN-U581361 Tomato 200607 Build 2 13 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184541 [Download][View] Facility Assigned ID: FA0AAD18BG05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0012 Quality Trim Threshold: 14.5