EST details — SGN-E372289

Search information 
Request: 372289Match: SGN-E372289
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179139Clone name: TUS-30-P17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179139 is on microarray TOM1 spot ID 1-1-8.4.2.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C76480 [cLES-18-C5] Trace: SGN-T101654 EST: SGN-E289212 Direction: 5' Facility: TIGR
Clone: SGN-C179139 [TUS-30-P17] Trace: SGN-T184730 EST: SGN-E372290 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E372289Length: 703 bp (908 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372289 [] (trimmed) GAAGGAAATGAATATGAAAACATTCACCACCACAAAGCCAGAAGAAGGCCTGGGTTTATTGGTTCATATGGCAAGAGAGCAATTAAGCAAAAGAA
AAGAGACAAAAAAAAGTTCAAGAGAATAGAGGAAAAAGAGAACAGTAAATATGAATTGCAGGAATCCACAAAAACCAACCCCAGATGAATTTGTA
CACAGGGAAACTGTTTAACAGCTTTCCCACATCTGGGGTTTAAGGTATCTAACCATTTTGCAACTAAGATGTCGGTTTCGATGATTCTACTGCAG
CCTTACAGATAGGGCACCAGTTCTTGAGCTTAAACCACTGCTTTATGCACTCCATATGATACCCGTGTTCACAACCCAGGTTCCCTATTTCATCT
CCGATCACGTACTCCTCCTGACAAATGCTGCACTTGATGTCATCTCCATCCTCATCAGCTTCTAGTGTTTCTGTTTCTGAAGCCATACCCTGATA
AATGTTTCTCCTGAGGCACTTTGATAGTTCTTCCTCGGGCAGAGCGGTACTAACAGAGCCAATCCTCTCCTCAAGTGCTAATAATTCCTCATAGG
ACATGTCATCAATATCTAGTCTCATGTCTCTATGCTGGTCATAAAAGTTAAGGCCACTGAGGAACAAATTGGACTCCAACGCCAGTAGTCGCTCA
TAAGATAACTCTTCATCTTGTTCGATTCTCTCAAGTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372289] SGN-U566900 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184729 [Download][View] Facility Assigned ID: FA0AAD18CH09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0010 Quality Trim Threshold: 14.5