EST details — SGN-E372539

Search information 
Request: 372539Match: SGN-E372539
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179151Clone name: TUS-31-A5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179151 is on microarray TOM1 spot ID 1-1-4.1.2.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C76510 [cLES-18-E11] Trace: SGN-T101493 EST: SGN-E289051 Direction: 5' Facility: TIGR
Clone: SGN-C179151 [TUS-31-A5] Trace: SGN-T184997 EST: SGN-E372540 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372539Length: 736 bp (904 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372539 [] (trimmed) GGAGTTAATGGAACATGAAAATAATGACTAAAACTTACATAAATACAGAGTCCACTGTTGATTGCTGGCCATTTAGCAACCAGGCATATATATTT
ATATATATATCAAGAAACATTTTTGTGGTTCAAAATTATTACTCATTTGTCATCTTCCACCAGACAACTCAACAGCATCATGATTAAACATTGTA
TCTTCTCCCCAATCAAATCGTCTCTGAAGTCTCTCGTATTCTTGTCTACGATTGACTTCAACGTGTTGCCACTCTTCCCATCTCTCAGCAAGCCC
TTCTCCTTCCAGCATCCTCACCACCTCCGACATTGCTGGACGGTCCTCTGGTGATGCCTGAGTGCACAGTAATGCCACCTGAATCATCATCTCCA
CTTCCCCCAGCTCGTAGTTATTATTCAGGTTGCGGTCTACAATTGCGTCCAGTTTTTTATCCCTTTGCAGTTTTCTGACATGGTCAAGCAACAAG
ACATCATCTTCATCTTCTAGGCGTGAGAAGTCTATTGCACGTTGGCCGGTTACAATTTCCAAAAGCATGATTCCATAGCCAAAAACATCAGTTTT
TTCTGATGATTTGCCAGTGGATAAGTATTCAGGAGCTATATGGCCCATTGTACCACGAACTTGAGTAGTCACATTGGTTTTCTTAACGTCAACTA
GCTTTGCCAGGCCAAAATCACCAACTACAGCTTCAAAATCTTCATCTAGTAACACATTAGCTGCTTTAACA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372539] SGN-U584981 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184996 [Download][View] Facility Assigned ID: FA0AAD19AA03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0055 Quality Trim Threshold: 14.5