EST details — SGN-E372873

Search information 
Request: 372873Match: SGN-E372873
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179902Clone name: TUS-32-P12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179902 is on microarray TOM1 spot ID 1-1-5.4.1.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C86886 [cLET-44-J24] Trace: SGN-T111516 EST: SGN-E298880 Direction: 5' Facility: TIGR
Clone: SGN-C179902 [TUS-32-P12] Trace: SGN-T1568 EST: SGN-E378703 Direction: 5' Facility: Giov. Lab
Clone: SGN-C179902 [TUS-32-P12] Trace: SGN-T186355 EST: SGN-E372874 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E372873Length: 699 bp (877 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372873 [] (trimmed) CAAATGAATGTGCACTAGTTATTTTGGTTTTGCTACTTCAATGTTGGAATGGAATACTATGTGTACAAGTTTTATTGTTTAGCTAACCGAAGGCA
ATCACATTGTTATTCTTTCCAGTGACAATGTGAAGCCCCAATACATGAATATTAAAGTTTTACAAAACGAATAATAATATCATTAGATAGTGAGA
CATAGATCCACAGCTTACAAGACACATCCATCCTAGGTTCAAGGTAACTTCACAAGTGCATCAGAGGGGTTGAAAACTACACGTAAAAACTCCTT
CTCCAAGAACCACTAACTCAAATGTGCACATCAAGGTTTCCGTGCCTTGTTTTTCCTCAATAGTCCGAGGAGAAAACACCGTGATAAGGATGACA
TAAAACGAGTGACCATAGAACCGAAGAACTTCACTTATCTTCACATGTAAGCTAGTGTGGTCCCACAAGTGGAGTCTGGGTTTGCCATCAAGCAT
CCATGGTCAAAAACCGCAGAAAGAATGTATCGATCCAGCATACAACGTTCTTGTTGAGCTAGTCTTGAAGCTGACAAGCAACTTATAAGGCAGAT
TGCTTCGGAGTGTTGCTAATACTTTCAGTATGTTCATCTATCTGACAATGTCTGATTAAGTCATTTGAAGTCATGGAATTGGAGATCCAGGAAAA
CTTTACCATGGTCTCCACAAACATAGGTAATATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372873] SGN-U582923 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186354 [Download][View] Facility Assigned ID: FA0AAD20DH06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0055 Quality Trim Threshold: 14.5