EST details — SGN-E373010
Search information |
Request: 373010 | Match: SGN-E373010 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C179767 | Clone name: TUS-32-J21 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C179767 is on microarray TOM1 spot ID 1-1-4.2.1.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C80722 [cLET-13-D2] | Trace: SGN-T106002 | EST: SGN-E294159 | Direction: 5' | Facility: TIGR |
Clone: SGN-C179767 [TUS-32-J21] | Trace: SGN-T186164 | EST: SGN-E373011 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E373010 | Length: 672 bp (878 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E373010 [] (trimmed)
GCAAATAAAATAACAATTAGTACGTAATTTCTCCTTCCTTAGATGATCCCTCAAATTTATTTGCACATATATACTAGAGTTACAGTTTTATACAA
ATTATTGCAAAACCAAAATAAAACCGAAAGAGATACACAAAGAAACTAAAATCCATCGACATCTTCTCCAAAGCGACCAGGGGAGGAGCCACCTT
GAACCAAGAGGGTTCATTCGAATCCCCTTCGGCGAAAAATTATATTACTTATACATGGTTAAAATAATTTTTTATGTATATATAGTAGATGTTAA
ACCCCCTTTATCGAGTTTGAACCCTCTTCTTGAAAATTCTGATTTCGCCTCTAAAAAAAGGATTCTTTAAAACCTTGAACTCTAAAATCAAGATC
CTGGCCGGTGAGTCTAGCCTGGTTTCACTGCATCGCCGGAGCTGCTGGCTGCACTGCCTCGCTAGTTCTCTCCAATTACTGTTGCTTACTGTCGT
TGGAGATTCTGTTATTCTCCTCACCTGGCCTGGAGAAGAGAGGAGAGAGGAGAAGGTGGAAGAGCGAGGGTAAAGGGAAAGGGTCAGGCGAGAGA
GGAGAAAGAGGACGGCGTCGGACACATTTCGCCGGAGCTCGTCGTGGAGGAGAAAGAGTAGCGGCGCTGCTGCCTTCTAGAAGAAGGAGAGAGGG
AGGCTGC
ATTATTGCAAAACCAAAATAAAACCGAAAGAGATACACAAAGAAACTAAAATCCATCGACATCTTCTCCAAAGCGACCAGGGGAGGAGCCACCTT
GAACCAAGAGGGTTCATTCGAATCCCCTTCGGCGAAAAATTATATTACTTATACATGGTTAAAATAATTTTTTATGTATATATAGTAGATGTTAA
ACCCCCTTTATCGAGTTTGAACCCTCTTCTTGAAAATTCTGATTTCGCCTCTAAAAAAAGGATTCTTTAAAACCTTGAACTCTAAAATCAAGATC
CTGGCCGGTGAGTCTAGCCTGGTTTCACTGCATCGCCGGAGCTGCTGGCTGCACTGCCTCGCTAGTTCTCTCCAATTACTGTTGCTTACTGTCGT
TGGAGATTCTGTTATTCTCCTCACCTGGCCTGGAGAAGAGAGGAGAGAGGAGAAGGTGGAAGAGCGAGGGTAAAGGGAAAGGGTCAGGCGAGAGA
GGAGAAAGAGGACGGCGTCGGACACATTTCGCCGGAGCTCGTCGTGGAGGAGAAAGAGTAGCGGCGCTGCTGCCTTCTAGAAGAAGGAGAGAGGG
AGGCTGC
Unigenes |
Current Unigene builds | |||||
[SGN-E373010] | SGN-U575448 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T186163 [Download][View] | Facility Assigned ID: FA0AAD20CE11FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.977 | Expected Error Rate: 0.0027 | Quality Trim Threshold: 12.5 |