Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E373617

Search information 
Request: 373617Match: SGN-E373617
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180116Clone name: TUS-33-I10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C93395 [cLEX-14-J15] Trace: SGN-T118120 EST: SGN-E305634 Direction: 5' Facility: TIGR
Clone: SGN-C180116 [TUS-33-I10] Trace: SGN-T186583 EST: SGN-E373618 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E373617Length: 703 bp (958 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E373617 [] (trimmed) GTCGAAAATCGAGTGATAAATAAAAGTGAACGAAGTACGTACATGTTTATTCCTTTACATAATCAAAGTAGATTAAATTAAATTCAGACACCACA
ATACGTTTTCAAAGCAGATGCACATCTTTGACCTTCTTCAGTATAGTAAAAATCAAGGAATTCAACATGATCAAAGGGCTTAAAGAGTAAAGAAT
GTTCTTCATCTACCAACTCTTCTGGTGCCTTTATTGTATATCCAGCTTTAGGTATTGAAAACAATCCAACTGAATACCTTGCTTCATTTCCTCTC
ATCATTACTCTATGATACGGAGAATGCAATCGACCATTTGCCCATGCGTATAAAGAGTCTCCAATCATGACGGTAAAAGTGTCTGGTGTAGGATC
AACATTGATCCATTTTCCATCTTTGGTCAAAACTTCAAGACCACTCACTTCATTTTGATATAATATAGTAACAATATTCTTGTCTGTGTGAGCAT
TTAGTCCTACTTTAGTTTCACTGCTTTGGGGTCCTTTATACTTCATCACTCGAAGAAGGTAACTAGTTGAATTCATATGTTCATCCATGTATTTT
TCGACCCCTAAACTCTCCACAATCATTCTCCTTATTGTTTGATCTAATTCTGATAGTTGCTCTGAGTATGACTGAATAGTCTTGCAAAAAGTAGG
ATTTCCTTGAGGCCACAGAATTTGAGTGAATTTTTCAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373617] SGN-U575221 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186582 [Download][View] Facility Assigned ID: FA0AAD21BE05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0022 Quality Trim Threshold: 14.5