EST details — SGN-E373708
Search information |
Request: 373708 | Match: SGN-E373708 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C180178 | Clone name: TUS-33-K24 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C106444 [cLPP-2-D22] | Trace: SGN-T173733 | EST: SGN-E362873 | Direction: 5' | Facility: TIGR |
Clone: SGN-C180178 [TUS-33-K24] | Trace: SGN-T186672 | EST: SGN-E373707 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E373708 | Length: 711 bp (889 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E373708 [] (trimmed)
GAAACAGAGTCATCAAAATTTGGGGAAAATTCTTACAAGAGAATCGAATAGATTTTGATTTGAGGAAAAAAAGGGGTGGTGTTGAAGTGGATTTG
TGATGGTAAGGAGTGTTTGGTTGTGAGTAAAATTCGTTTTTTCTTTTTTGGGTTTTGGGTGGTTGGAGTAAAGAGCGAAAGAGAAGGAAAATTGC
AGGTATGAATAGAGGAGGAATTGTAATTGGAGGGCCAATGCGAAAGTCTTTTAAGGACTCTCTTATAGTTCTTGAAGCTGATATTCAGCATGCTA
ATACTCTGGCATCTGACTTTCCCCGAGAGTACGATGGGGCCTGCCTACAGATGAGAATGTCCTACAGTCCAGCAGCGCACCTGTTCCTTTTCTTA
GTCCATTGGACTGATTGCCACCTTGCTGGTGCACTTGGATTGATGAGACTTCTTATTTACTAGGTTTATGTTGATGGCACCACAACCATGTCTGT
TCATGACAGGAAAGCGAGCATTACGGAGTTCTATGCTGTTATTTATCCCTCCTTACTTTAACTTGAAAGAGGTGTTACGGATTCATAAGACAAAA
AGCAAAAAGCATTATGCCAGGAGAGATACAGGAGAAGAGATGATGAGGATTACAGATCATCTGCTGACTCTGACATTGAAAGGGAAGAGGAATGT
GGAATCTGCATGGAAATGAACAGCAAAATTGTTCTTCCCAAATGCA
TGATGGTAAGGAGTGTTTGGTTGTGAGTAAAATTCGTTTTTTCTTTTTTGGGTTTTGGGTGGTTGGAGTAAAGAGCGAAAGAGAAGGAAAATTGC
AGGTATGAATAGAGGAGGAATTGTAATTGGAGGGCCAATGCGAAAGTCTTTTAAGGACTCTCTTATAGTTCTTGAAGCTGATATTCAGCATGCTA
ATACTCTGGCATCTGACTTTCCCCGAGAGTACGATGGGGCCTGCCTACAGATGAGAATGTCCTACAGTCCAGCAGCGCACCTGTTCCTTTTCTTA
GTCCATTGGACTGATTGCCACCTTGCTGGTGCACTTGGATTGATGAGACTTCTTATTTACTAGGTTTATGTTGATGGCACCACAACCATGTCTGT
TCATGACAGGAAAGCGAGCATTACGGAGTTCTATGCTGTTATTTATCCCTCCTTACTTTAACTTGAAAGAGGTGTTACGGATTCATAAGACAAAA
AGCAAAAAGCATTATGCCAGGAGAGATACAGGAGAAGAGATGATGAGGATTACAGATCATCTGCTGACTCTGACATTGAAAGGGAAGAGGAATGT
GGAATCTGCATGGAAATGAACAGCAAAATTGTTCTTCCCAAATGCA
Unigenes |
Current Unigene builds | |||||
[SGN-E373708] | SGN-U568639 | Tomato 200607 | Build 2 | 25 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T186673 [Download][View] | Facility Assigned ID: FA0AAD21BF12RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.955 | Expected Error Rate: 0.0184 | Quality Trim Threshold: 14.5 |