EST details — SGN-E373909
Search information |
Request: 373909 | Match: SGN-E373909 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C179917 | Clone name: TUS-33-A3 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C86919 [cLET-44-L2] | Trace: SGN-T111517 | EST: SGN-E298881 | Direction: 5' | Facility: TIGR |
Clone: SGN-C179917 [TUS-33-A3] | Trace: SGN-T186362 | EST: SGN-E373910 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E373909 | Length: 719 bp (926 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E373909 [] (trimmed)
AACGTCTTATATGAAGGAAACATACTGTTGTTAAATATTGTCTAATATGAAATATCATATATACAAGTCACAAGCATGGTCTACTGTATTCCCCT
TAAAACATGCTACTGCAATAAGTTTCTAAGTTCGGGCATAAATCTGACTCCACAGTGGAGTCACCAGAAAATTTAATTGGCAACAAAATGGTATC
TTGAGTCGACATAACTCTCAACATCCCAGAGGAAAGACCCAAAAGTTACAGCCTCCAAAACAAGCCGCCTCAGCCCACCAAAACTGATCTTAATA
AGTTCATCTTTAGATGAGTCAATAGTGCCTTGAGGGGTGATAACAATCTCAGGTCTACCAAATAGTGCTTCGGTGTGTTTCTCAATCATGCCTAT
GGCCTCTCGAGATCTGATGGTTGCATATCTCTGGAGGGTCTCCCCATCAAATGACATCACATAGTTTCTCAATCTTGAGGGTTTTATCCCCTGGC
CAAAACCTCCAGGACTCACACCACCTGCAGACCATGATGTCAATTCTGGGTGGGTTTGTGTTGTTGATCTGAAAGAGGTATCACTCCTATCACCA
CTGATATCCTCGCCTGCCACTTGCTGGATGCTACTATCTTCATTGTCTACACCCGGAGGAAGGACTTTCATGCTCTTTTCCAGCTGAAACCTCTG
GTCCACTCTCCTGAGAAATATCCATACATAATTGATGCAGCATAAACTTGGCCT
TAAAACATGCTACTGCAATAAGTTTCTAAGTTCGGGCATAAATCTGACTCCACAGTGGAGTCACCAGAAAATTTAATTGGCAACAAAATGGTATC
TTGAGTCGACATAACTCTCAACATCCCAGAGGAAAGACCCAAAAGTTACAGCCTCCAAAACAAGCCGCCTCAGCCCACCAAAACTGATCTTAATA
AGTTCATCTTTAGATGAGTCAATAGTGCCTTGAGGGGTGATAACAATCTCAGGTCTACCAAATAGTGCTTCGGTGTGTTTCTCAATCATGCCTAT
GGCCTCTCGAGATCTGATGGTTGCATATCTCTGGAGGGTCTCCCCATCAAATGACATCACATAGTTTCTCAATCTTGAGGGTTTTATCCCCTGGC
CAAAACCTCCAGGACTCACACCACCTGCAGACCATGATGTCAATTCTGGGTGGGTTTGTGTTGTTGATCTGAAAGAGGTATCACTCCTATCACCA
CTGATATCCTCGCCTGCCACTTGCTGGATGCTACTATCTTCATTGTCTACACCCGGAGGAAGGACTTTCATGCTCTTTTCCAGCTGAAACCTCTG
GTCCACTCTCCTGAGAAATATCCATACATAATTGATGCAGCATAAACTTGGCCT
Unigenes |
Current Unigene builds | |||||
[SGN-E373909] | SGN-U568023 | Tomato 200607 | Build 2 | 77 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T186361 [Download][View] | Facility Assigned ID: FA0AAD21AA02FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.977 | Expected Error Rate: 0.0044 | Quality Trim Threshold: 14.5 |