EST details — SGN-E373919

Search information 
Request: 373919Match: SGN-E373919
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179967Clone name: TUS-33-C5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C87057 [cLET-45-C6] Trace: SGN-T111739 EST: SGN-E300567 Direction: 5' Facility: TIGR
Clone: SGN-C179967 [TUS-33-C5] Trace: SGN-T186370 EST: SGN-E373918 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E373919Length: 684 bp (936 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E373919 [] (trimmed) TTCCAATCAACTAGCAAAAATGTGTAAAGGATTTCAACCAAACGAGAAAGATCGCCTGAAAATCAAAGGCTTTTATCTCCATTTATCACCGACTG
AAACCGTCTCACCGGATTCTCTAACTCTGCATTATCTCCCTAGAATTAGTGAGAGTCCATTAGAGATTAATGATTCCAAAATCCGATCCAATTCC
CCCGGTTTCGTTACGCTTTACCGGGTAGTATCAGCTGACAATGTAACAACGAAAGGTGTTATTTACGGAAGCAGGGACAGAGTTAAAGCCAGTGA
AGGAGTAAAATTTGAAATATTCATGGCTGATGTAAAGCTCATAAAAGGTATTTTCATGAAAGATCTACACAACTGGAGAATCGATTGCAAGTGCG
CTTTGTTGGAAAACGACGATTTAAAAGTGAAAGGAGCAGAGGTGTGTGTGGCGGTGGAAGGACGCACCGCCGCGCCGCCGGAAGTGATTACTGAG
AAGGTGGAGATGACGGTGAGATCACGGCGGAGGAGCTGTTTTCAGAAGCTGGAGGAGATTCCTGAACAAAGAGAAGTTGAAAATGACGAGTCTAC
TTGTTGCTGCTCGGAGTGTGAAGGTGAAGATGACGATTCGGACGACACCGATACGGCGGAGGGAGTTGGGTGGGCAGTAGATGTAGGGATATGGG
TGATGTGCCTTGGGGGTGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373919] SGN-U567943 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186371 [Download][View] Facility Assigned ID: FA0AAD21AB03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0042 Quality Trim Threshold: 14.5