EST details — SGN-E374080

Search information 
Request: 374080Match: SGN-E374080
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179941Clone name: TUS-33-B3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C86983 [cLET-44-P12] Trace: SGN-T111385 EST: SGN-E298749 Direction: 5' Facility: TIGR
Clone: SGN-C179941 [TUS-33-B3] Trace: SGN-T186695 EST: SGN-E374081 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E374080Length: 714 bp (909 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374080 [] (trimmed) AACGTCTTATATGAAGGAAACATACTGTTGTTAAATATTGTCTAATATGAAATATCATATATACAAGTCACAAGCATGGTCTACTGTATTCCCCT
TAAAACATGCTACTGCAATAAGTTTCTAAGTTCGGGCATAAATCTGACTCCACAGTGGAGTCACCAGAAAATTTAATTGGCAACAAAATGGTATC
TTGAGTCGACATAACTCTCAACATCCCAGAGGAAAGACCCAAAAGTTACAGCCTCCAAAACAAGCCGCCTCAGCCCACCAAAACTGATCTTAATA
AGTTCATCTTTAGATGAGTCAATAGTGCCTTGAGGGGTGATAACAATCTCAGGTCTACCAAATAGTGCTTCGGTGTGTTTCTCAATCATGCCTAT
GGCCTCTCGAGATCTGATGGTTGCATATCTCTGGAGGGTCTCCCCATCAAATGACATCACATAGTTTCTCAATCTTGAGGGTTTTATCCCCTGGC
CAAAACCTCCAGGACTCACACCACCTGCAGACCATGATGTCAATTCTGGGTGGGTTTGTGTTGTTGATCTGAAAGAGGTATCACTCCTATCACCA
CTGATATCCTCGCCTGCCACTTGCTGGATGCTACTATCTTCATTGTCTACACCCGGAGGAAGGACTTTCATGCTCTTTTCCAGCTGAAACCTCTG
GTCCACTCTCCTGAGAAAATATCCATACATAATTGATGCAGCATAAACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374080] SGN-U568023 Tomato 200607 Build 2 77 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186694 [Download][View] Facility Assigned ID: FA0AAD21CA02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0028 Quality Trim Threshold: 14.5