EST details — SGN-E374139

Search information 
Request: 374139Match: SGN-E374139
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180179Clone name: TUS-33-L1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C106447 [cLPP-2-D5] Trace: SGN-T173868 EST: SGN-E363008 Direction: 5' Facility: TIGR
Clone: SGN-C180179 [TUS-33-L1] Trace: SGN-T186752 EST: SGN-E374138 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E374139Length: 660 bp (898 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E374139 [] (trimmed) GATTTTCACTCACTGTTTCATTCATAATACAAAAAAATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGATAATCTTCCGGAATCCGATTTTGA
TATCGGACTCCGCCATGGAAGATGAGTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTC
GAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTC
TTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTAT
CGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTTGTTGCTCCGAGCTCTAGGGTTTTCGGCCGGGGTGA
GCTTGTTATGGACCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCGTTGATTTTACAGCTGCTCTTCCCCTGCCTCAAATTGTTA
TTCGCTATGTAATCCCAGCAGCAAAAAGAAATGGTTCGGGTCATTCCAAAAGTACACTTGCACTTATCGTTCTCATACAATATGTGCCAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374139] SGN-U566785 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186753 [Download][View] Facility Assigned ID: FA0AAD21CF01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0019 Quality Trim Threshold: 14.5