EST details — SGN-E374224
Search information |
Request: 374224 | Match: SGN-E374224 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C180185 | Clone name: TUS-33-L7 |
| ||
Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C106463 [cLPP-2-E20] | Trace: SGN-T173824 | EST: SGN-E362964 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E374224 | Length: 709 bp (934 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E374224 [] (trimmed)
GGTGAACCCATTAATTAACATTATCGTCATTTGGTTCACGTGAAAAAAACCAAGCCCACAATATCTAAAATATGTATATATATTAGCTACTTTAA
GCTTCAATGACATTTTAGTTCTTGTATCACATCTCTATTTTTGTGTTCTAAAACATAATGACAACAACAAGTGTTCTTTCTAGTGGATTCAACCA
CTCAACCCTCCCTCAGTCTTACGTTCGACCTGAATCTCAAAGACCTTGCATGTCTGAAGTTGTTGATAGCGACGATCTTGTCCCAGTCATTGATA
TGTCTTGTACTAATAGGAACGTTATCGTTCATCAAATCGGTGAAGCTTGTCGTCTTTATGGGTTTTTCCAGGTGATAAATCACGGTGTGTCGAAG
AAGGTGATAGATGAAATGTTAGGGGTAAGTCATGAATTTTTTAAGCTACCAGTTGAAGAAAAGATGAAATTGTATTCTGATGATCCATCAAAAAC
TATGAGATTATCAACTAGTTTTAATGTTAAGAAGGAAGCTGTTCATAATTGGAGAGATTATCTTAGGCTACATTGTTATCCTTTGGACAAATATG
CCCCTGAATGGCCTTCTAAATCCTCTTCTTTCAGGGAAATAGTAAGCAAATATTGCATGGAAGTTAGAGAGCTTGGATATAGATGGGAAGAGGCA
ATATCAGAGAGCTTAGGGCTTGAGAATGATGGTATAAAAAATGT
GCTTCAATGACATTTTAGTTCTTGTATCACATCTCTATTTTTGTGTTCTAAAACATAATGACAACAACAAGTGTTCTTTCTAGTGGATTCAACCA
CTCAACCCTCCCTCAGTCTTACGTTCGACCTGAATCTCAAAGACCTTGCATGTCTGAAGTTGTTGATAGCGACGATCTTGTCCCAGTCATTGATA
TGTCTTGTACTAATAGGAACGTTATCGTTCATCAAATCGGTGAAGCTTGTCGTCTTTATGGGTTTTTCCAGGTGATAAATCACGGTGTGTCGAAG
AAGGTGATAGATGAAATGTTAGGGGTAAGTCATGAATTTTTTAAGCTACCAGTTGAAGAAAAGATGAAATTGTATTCTGATGATCCATCAAAAAC
TATGAGATTATCAACTAGTTTTAATGTTAAGAAGGAAGCTGTTCATAATTGGAGAGATTATCTTAGGCTACATTGTTATCCTTTGGACAAATATG
CCCCTGAATGGCCTTCTAAATCCTCTTCTTTCAGGGAAATAGTAAGCAAATATTGCATGGAAGTTAGAGAGCTTGGATATAGATGGGAAGAGGCA
ATATCAGAGAGCTTAGGGCTTGAGAATGATGGTATAAAAAATGT
Unigenes |
Current Unigene builds | |||||
[SGN-E374224] | SGN-U576121 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T186838 [Download][View] | Facility Assigned ID: FA0AAD21CF04RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.957 | Expected Error Rate: 0.0073 | Quality Trim Threshold: 14.5 |