EST details — SGN-E374224

Search information 
Request: 374224Match: SGN-E374224
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180185Clone name: TUS-33-L7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C106463 [cLPP-2-E20] Trace: SGN-T173824 EST: SGN-E362964 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E374224Length: 709 bp (934 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E374224 [] (trimmed) GGTGAACCCATTAATTAACATTATCGTCATTTGGTTCACGTGAAAAAAACCAAGCCCACAATATCTAAAATATGTATATATATTAGCTACTTTAA
GCTTCAATGACATTTTAGTTCTTGTATCACATCTCTATTTTTGTGTTCTAAAACATAATGACAACAACAAGTGTTCTTTCTAGTGGATTCAACCA
CTCAACCCTCCCTCAGTCTTACGTTCGACCTGAATCTCAAAGACCTTGCATGTCTGAAGTTGTTGATAGCGACGATCTTGTCCCAGTCATTGATA
TGTCTTGTACTAATAGGAACGTTATCGTTCATCAAATCGGTGAAGCTTGTCGTCTTTATGGGTTTTTCCAGGTGATAAATCACGGTGTGTCGAAG
AAGGTGATAGATGAAATGTTAGGGGTAAGTCATGAATTTTTTAAGCTACCAGTTGAAGAAAAGATGAAATTGTATTCTGATGATCCATCAAAAAC
TATGAGATTATCAACTAGTTTTAATGTTAAGAAGGAAGCTGTTCATAATTGGAGAGATTATCTTAGGCTACATTGTTATCCTTTGGACAAATATG
CCCCTGAATGGCCTTCTAAATCCTCTTCTTTCAGGGAAATAGTAAGCAAATATTGCATGGAAGTTAGAGAGCTTGGATATAGATGGGAAGAGGCA
ATATCAGAGAGCTTAGGGCTTGAGAATGATGGTATAAAAAATGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374224] SGN-U576121 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186838 [Download][View] Facility Assigned ID: FA0AAD21CF04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0073 Quality Trim Threshold: 14.5